Protein–RNA interactions for Protein: Q60769

Tnfaip3, Tumor necrosis factor alpha-induced protein 3, mousemouse

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfaip3Q60769 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Tnfaip3Q60769 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Tnfaip3Q60769 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
Tnfaip3Q60769 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Tnfaip3Q60769 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC14.53□□□□□ -0.08
Tnfaip3Q60769 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Tnfaip3Q60769 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Tnfaip3Q60769 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Tnfaip3Q60769 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Tnfaip3Q60769 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Tnfaip3Q60769 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Tnfaip3Q60769 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Tnfaip3Q60769 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Tnfaip3Q60769 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Tnfaip3Q60769 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Tnfaip3Q60769 Gm7669-201ENSMUST00000210184 1603 ntBASIC14.52□□□□□ -0.08
Tnfaip3Q60769 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.08
Tnfaip3Q60769 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Tnfaip3Q60769 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Tnfaip3Q60769 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Tnfaip3Q60769 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Tnfaip3Q60769 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Tnfaip3Q60769 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Tnfaip3Q60769 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Tnfaip3Q60769 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Tnfaip3Q60769 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Tnfaip3Q60769 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Tnfaip3Q60769 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Tnfaip3Q60769 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Tnfaip3Q60769 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC14.52□□□□□ -0.09
Tnfaip3Q60769 Gm18489-201ENSMUST00000172565 551 ntBASIC14.52□□□□□ -0.09
Tnfaip3Q60769 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC14.52□□□□□ -0.09
Tnfaip3Q60769 Gm43935-201ENSMUST00000203569 1050 ntBASIC14.52□□□□□ -0.09
Tnfaip3Q60769 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC14.52□□□□□ -0.09
Tnfaip3Q60769 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC14.52□□□□□ -0.09
Tnfaip3Q60769 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Tnfaip3Q60769 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Tnfaip3Q60769 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Tnfaip3Q60769 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
Tnfaip3Q60769 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
Tnfaip3Q60769 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Tnfaip3Q60769 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Tnfaip3Q60769 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC14.52□□□□□ -0.09
Tnfaip3Q60769 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Tnfaip3Q60769 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Tnfaip3Q60769 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Tnfaip3Q60769 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC14.52□□□□□ -0.09
Tnfaip3Q60769 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC14.52□□□□□ -0.09
Tnfaip3Q60769 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Tnfaip3Q60769 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Tnfaip3Q60769 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Tnfaip3Q60769 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC14.52□□□□□ -0.09
Tnfaip3Q60769 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Tnfaip3Q60769 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Tnfaip3Q60769 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
Tnfaip3Q60769 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Tnfaip3Q60769 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
Tnfaip3Q60769 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC14.51□□□□□ -0.09
Tnfaip3Q60769 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Tnfaip3Q60769 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Tnfaip3Q60769 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
Tnfaip3Q60769 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC14.51□□□□□ -0.09
Tnfaip3Q60769 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Tnfaip3Q60769 Ipo8-201ENSMUST00000048418 5360 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Tnfaip3Q60769 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
Tnfaip3Q60769 Zkscan3-208ENSMUST00000224820 5398 ntBASIC14.51□□□□□ -0.09
Tnfaip3Q60769 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
Tnfaip3Q60769 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Tnfaip3Q60769 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC14.51□□□□□ -0.09
Tnfaip3Q60769 Gm14140-201ENSMUST00000119999 995 ntBASIC14.51□□□□□ -0.09
Tnfaip3Q60769 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Tnfaip3Q60769 Gm42670-201ENSMUST00000201816 1292 ntBASIC14.51□□□□□ -0.09
Tnfaip3Q60769 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Tnfaip3Q60769 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
Tnfaip3Q60769 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Tnfaip3Q60769 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC14.51□□□□□ -0.09
Tnfaip3Q60769 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC14.51□□□□□ -0.09
Tnfaip3Q60769 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Tnfaip3Q60769 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC14.51□□□□□ -0.09
Tnfaip3Q60769 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Tnfaip3Q60769 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC14.51□□□□□ -0.09
Tnfaip3Q60769 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Tnfaip3Q60769 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Tnfaip3Q60769 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Tnfaip3Q60769 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Tnfaip3Q60769 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Tnfaip3Q60769 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Tnfaip3Q60769 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Tnfaip3Q60769 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Tnfaip3Q60769 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC14.5□□□□□ -0.09
Tnfaip3Q60769 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Tnfaip3Q60769 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
Tnfaip3Q60769 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Tnfaip3Q60769 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Tnfaip3Q60769 Nr3c2-204ENSMUST00000109913 5916 ntAPPRIS P2 TSL 5 BASIC14.5□□□□□ -0.09
Tnfaip3Q60769 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Tnfaip3Q60769 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Tnfaip3Q60769 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Tnfaip3Q60769 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Tnfaip3Q60769 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 52.2 ms