Protein–RNA interactions for Protein: Q5RJF7

Cacna2d4, Voltage-dependent calcium channel subunit alpha-2/delta-4, mousemouse

Predictions only

Length 1,116 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna2d4Q5RJF7 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Cacna2d4Q5RJF7 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Cacna2d4Q5RJF7 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Cacna2d4Q5RJF7 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Cacna2d4Q5RJF7 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Cacna2d4Q5RJF7 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Cacna2d4Q5RJF7 Dlg5-203ENSMUST00000090398 7851 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Cacna2d4Q5RJF7 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Cacna2d4Q5RJF7 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Cacna2d4Q5RJF7 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Cacna2d4Q5RJF7 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Cacna2d4Q5RJF7 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Cacna2d4Q5RJF7 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC17.22■□□□□ 0.35
Cacna2d4Q5RJF7 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Cacna2d4Q5RJF7 Gm7669-201ENSMUST00000210184 1603 ntBASIC17.22■□□□□ 0.35
Cacna2d4Q5RJF7 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC17.22■□□□□ 0.35
Cacna2d4Q5RJF7 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC17.22■□□□□ 0.35
Cacna2d4Q5RJF7 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Cacna2d4Q5RJF7 Gm11780-201ENSMUST00000136880 516 ntBASIC17.22■□□□□ 0.35
Cacna2d4Q5RJF7 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC17.22■□□□□ 0.35
Cacna2d4Q5RJF7 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Cacna2d4Q5RJF7 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Cacna2d4Q5RJF7 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC17.22■□□□□ 0.35
Cacna2d4Q5RJF7 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Cacna2d4Q5RJF7 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Cacna2d4Q5RJF7 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Cacna2d4Q5RJF7 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
Cacna2d4Q5RJF7 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Cacna2d4Q5RJF7 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Cacna2d4Q5RJF7 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Cacna2d4Q5RJF7 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Cacna2d4Q5RJF7 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Cacna2d4Q5RJF7 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Cacna2d4Q5RJF7 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Cacna2d4Q5RJF7 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Cacna2d4Q5RJF7 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Cacna2d4Q5RJF7 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Cacna2d4Q5RJF7 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Cacna2d4Q5RJF7 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
Cacna2d4Q5RJF7 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Cacna2d4Q5RJF7 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Cacna2d4Q5RJF7 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Cacna2d4Q5RJF7 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC17.21■□□□□ 0.35
Cacna2d4Q5RJF7 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
Cacna2d4Q5RJF7 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Cacna2d4Q5RJF7 Lrrc32-203ENSMUST00000205956 4576 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
Cacna2d4Q5RJF7 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Cacna2d4Q5RJF7 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Cacna2d4Q5RJF7 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Cacna2d4Q5RJF7 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC17.21■□□□□ 0.35
Cacna2d4Q5RJF7 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Cacna2d4Q5RJF7 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Cacna2d4Q5RJF7 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Cacna2d4Q5RJF7 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Cacna2d4Q5RJF7 Arl5b-202ENSMUST00000069870 6981 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Cacna2d4Q5RJF7 Nrxn1-209ENSMUST00000161402 4953 ntTSL 5 BASIC17.2■□□□□ 0.34
Cacna2d4Q5RJF7 Zbtb14-203ENSMUST00000112676 3909 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Cacna2d4Q5RJF7 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Cacna2d4Q5RJF7 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Cacna2d4Q5RJF7 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Cacna2d4Q5RJF7 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Cacna2d4Q5RJF7 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Cacna2d4Q5RJF7 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Cacna2d4Q5RJF7 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC17.2■□□□□ 0.34
Cacna2d4Q5RJF7 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
Cacna2d4Q5RJF7 Gm25990-201ENSMUST00000102440 86 ntBASIC17.2■□□□□ 0.34
Cacna2d4Q5RJF7 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC17.2■□□□□ 0.34
Cacna2d4Q5RJF7 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Cacna2d4Q5RJF7 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC17.2■□□□□ 0.34
Cacna2d4Q5RJF7 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
Cacna2d4Q5RJF7 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Cacna2d4Q5RJF7 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC17.2■□□□□ 0.34
Cacna2d4Q5RJF7 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC17.2■□□□□ 0.34
Cacna2d4Q5RJF7 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
Cacna2d4Q5RJF7 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC17.2■□□□□ 0.34
Cacna2d4Q5RJF7 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Cacna2d4Q5RJF7 Adamts2-201ENSMUST00000040523 7266 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Cacna2d4Q5RJF7 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC17.2■□□□□ 0.34
Cacna2d4Q5RJF7 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Cacna2d4Q5RJF7 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Cacna2d4Q5RJF7 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC17.2■□□□□ 0.34
Cacna2d4Q5RJF7 Iqsec3-201ENSMUST00000046373 6840 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Cacna2d4Q5RJF7 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
Cacna2d4Q5RJF7 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Cacna2d4Q5RJF7 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC17.19■□□□□ 0.34
Cacna2d4Q5RJF7 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Cacna2d4Q5RJF7 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Cacna2d4Q5RJF7 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Cacna2d4Q5RJF7 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Cacna2d4Q5RJF7 Tchh-201ENSMUST00000064257 5823 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
Cacna2d4Q5RJF7 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Cacna2d4Q5RJF7 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC17.19■□□□□ 0.34
Cacna2d4Q5RJF7 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC17.19■□□□□ 0.34
Cacna2d4Q5RJF7 AC164629.2-201ENSMUST00000217916 270 ntBASIC17.19■□□□□ 0.34
Cacna2d4Q5RJF7 Gm7461-201ENSMUST00000058918 827 ntBASIC17.19■□□□□ 0.34
Cacna2d4Q5RJF7 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
Cacna2d4Q5RJF7 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Cacna2d4Q5RJF7 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
Cacna2d4Q5RJF7 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Cacna2d4Q5RJF7 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 32.6 ms