Protein–RNA interactions for Protein: Q3MI99

Ccbe1, Collagen and calcium-binding EGF domain-containing protein 1, mousemouse

Predictions only

Length 408 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccbe1Q3MI99 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ccbe1Q3MI99 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
Ccbe1Q3MI99 Cep170b-203ENSMUST00000179041 6565 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
Ccbe1Q3MI99 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ccbe1Q3MI99 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ccbe1Q3MI99 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ccbe1Q3MI99 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ccbe1Q3MI99 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ccbe1Q3MI99 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ccbe1Q3MI99 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ccbe1Q3MI99 Cpne1-202ENSMUST00000109607 3441 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ccbe1Q3MI99 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Ccbe1Q3MI99 Mpped1-203ENSMUST00000109470 3281 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ccbe1Q3MI99 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ccbe1Q3MI99 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ccbe1Q3MI99 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Ccbe1Q3MI99 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ccbe1Q3MI99 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Ccbe1Q3MI99 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Ccbe1Q3MI99 Csrnp1-201ENSMUST00000035101 2906 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ccbe1Q3MI99 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ccbe1Q3MI99 Pcdh7-202ENSMUST00000094783 3752 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ccbe1Q3MI99 Gm45560-201ENSMUST00000211492 1472 ntBASIC14.01□□□□□ -0.17
Ccbe1Q3MI99 Mto1-201ENSMUST00000034896 2366 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ccbe1Q3MI99 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Ccbe1Q3MI99 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ccbe1Q3MI99 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Ccbe1Q3MI99 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Ccbe1Q3MI99 Trmt10c-201ENSMUST00000059052 3002 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ccbe1Q3MI99 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC14.01□□□□□ -0.17
Ccbe1Q3MI99 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ccbe1Q3MI99 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC14.01□□□□□ -0.17
Ccbe1Q3MI99 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC14.01□□□□□ -0.17
Ccbe1Q3MI99 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Ccbe1Q3MI99 Gm7977-201ENSMUST00000193787 748 ntBASIC14.01□□□□□ -0.17
Ccbe1Q3MI99 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Ccbe1Q3MI99 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC14.01□□□□□ -0.17
Ccbe1Q3MI99 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Ccbe1Q3MI99 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Ccbe1Q3MI99 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Ccbe1Q3MI99 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ccbe1Q3MI99 Ralyl-206ENSMUST00000193117 2933 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
Ccbe1Q3MI99 Ncln-202ENSMUST00000118498 2841 ntAPPRIS ALT1 TSL 5 BASIC14.01□□□□□ -0.17
Ccbe1Q3MI99 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ccbe1Q3MI99 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Ccbe1Q3MI99 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ccbe1Q3MI99 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Ccbe1Q3MI99 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ccbe1Q3MI99 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Ccbe1Q3MI99 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC14.01□□□□□ -0.17
Ccbe1Q3MI99 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ccbe1Q3MI99 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC14□□□□□ -0.17
Ccbe1Q3MI99 Actl10-202ENSMUST00000226583 1501 ntBASIC14□□□□□ -0.17
Ccbe1Q3MI99 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Ccbe1Q3MI99 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Ccbe1Q3MI99 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ccbe1Q3MI99 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Ccbe1Q3MI99 Gemin5-202ENSMUST00000102711 4919 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Ccbe1Q3MI99 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC14□□□□□ -0.17
Ccbe1Q3MI99 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC14□□□□□ -0.17
Ccbe1Q3MI99 Gm37025-201ENSMUST00000195159 829 ntBASIC14□□□□□ -0.17
Ccbe1Q3MI99 AL672049.1-201ENSMUST00000197943 91 ntBASIC14□□□□□ -0.17
Ccbe1Q3MI99 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ccbe1Q3MI99 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC14□□□□□ -0.17
Ccbe1Q3MI99 Nos1ap-202ENSMUST00000160456 3022 ntAPPRIS P2 TSL 5 BASIC14□□□□□ -0.17
Ccbe1Q3MI99 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC14□□□□□ -0.17
Ccbe1Q3MI99 Fbxl19-207ENSMUST00000206893 3449 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Ccbe1Q3MI99 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC14□□□□□ -0.17
Ccbe1Q3MI99 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ccbe1Q3MI99 Tfe3-201ENSMUST00000077680 3277 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ccbe1Q3MI99 Jakmip1-212ENSMUST00000174629 1941 ntTSL 5 BASIC14□□□□□ -0.17
Ccbe1Q3MI99 Olfr56-201ENSMUST00000056759 1925 ntTSL 5 BASIC14□□□□□ -0.17
Ccbe1Q3MI99 Rgs3-204ENSMUST00000107420 2752 ntTSL 1 (best) BASIC14□□□□□ -0.17
Ccbe1Q3MI99 Gtf2ird1-205ENSMUST00000100654 3156 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Ccbe1Q3MI99 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC13.99□□□□□ -0.17
Ccbe1Q3MI99 Ctps-201ENSMUST00000030381 2705 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ccbe1Q3MI99 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Ccbe1Q3MI99 Slc17a9-201ENSMUST00000094218 2275 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Ccbe1Q3MI99 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ccbe1Q3MI99 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Ccbe1Q3MI99 Runx2-202ENSMUST00000113571 5898 ntAPPRIS P3 TSL 5 BASIC13.99□□□□□ -0.17
Ccbe1Q3MI99 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC13.99□□□□□ -0.17
Ccbe1Q3MI99 Gm9918-201ENSMUST00000181801 2192 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ccbe1Q3MI99 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ccbe1Q3MI99 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ccbe1Q3MI99 Iqsec3-201ENSMUST00000046373 6840 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ccbe1Q3MI99 Catip-201ENSMUST00000097697 2101 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ccbe1Q3MI99 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Ccbe1Q3MI99 Dimt1-201ENSMUST00000022203 2051 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ccbe1Q3MI99 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ccbe1Q3MI99 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ccbe1Q3MI99 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC13.99□□□□□ -0.17
Ccbe1Q3MI99 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
Ccbe1Q3MI99 AC166341.7-201ENSMUST00000221698 126 ntBASIC13.99□□□□□ -0.17
Ccbe1Q3MI99 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ccbe1Q3MI99 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ccbe1Q3MI99 Lysmd3-201ENSMUST00000049055 2338 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Ccbe1Q3MI99 Crem-201ENSMUST00000025069 2931 ntTSL 5 BASIC13.99□□□□□ -0.17
Ccbe1Q3MI99 Wdr46-201ENSMUST00000025170 2227 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ccbe1Q3MI99 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 37.3 ms