Protein–RNA interactions for Protein: P97770

Thumpd3, THUMP domain-containing protein 3, mousemouse

Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thumpd3P97770 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
Thumpd3P97770 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.11
Thumpd3P97770 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Thumpd3P97770 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Thumpd3P97770 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Thumpd3P97770 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Thumpd3P97770 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.11
Thumpd3P97770 Gm6858-201ENSMUST00000208582 1468 ntBASIC15.77■□□□□ 0.11
Thumpd3P97770 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Thumpd3P97770 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Thumpd3P97770 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Thumpd3P97770 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Thumpd3P97770 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC15.76■□□□□ 0.11
Thumpd3P97770 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Thumpd3P97770 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC15.76■□□□□ 0.11
Thumpd3P97770 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC15.76■□□□□ 0.11
Thumpd3P97770 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
Thumpd3P97770 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Thumpd3P97770 Runx2-202ENSMUST00000113571 5898 ntAPPRIS P3 TSL 5 BASIC15.76■□□□□ 0.11
Thumpd3P97770 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Thumpd3P97770 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
Thumpd3P97770 Gm24589-201ENSMUST00000116692 94 ntBASIC15.76■□□□□ 0.11
Thumpd3P97770 Gm15794-201ENSMUST00000120182 631 ntBASIC15.76■□□□□ 0.11
Thumpd3P97770 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC15.76■□□□□ 0.11
Thumpd3P97770 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC15.76■□□□□ 0.11
Thumpd3P97770 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC15.76■□□□□ 0.11
Thumpd3P97770 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Thumpd3P97770 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC15.76■□□□□ 0.11
Thumpd3P97770 Wnt10b-206ENSMUST00000228546 2709 ntBASIC15.76■□□□□ 0.11
Thumpd3P97770 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Thumpd3P97770 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC15.76■□□□□ 0.11
Thumpd3P97770 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Thumpd3P97770 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Thumpd3P97770 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
Thumpd3P97770 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
Thumpd3P97770 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
Thumpd3P97770 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Thumpd3P97770 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Thumpd3P97770 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
Thumpd3P97770 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
Thumpd3P97770 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Thumpd3P97770 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
Thumpd3P97770 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Thumpd3P97770 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Thumpd3P97770 Casz1-202ENSMUST00000122222 7926 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
Thumpd3P97770 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Thumpd3P97770 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
Thumpd3P97770 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC15.75■□□□□ 0.11
Thumpd3P97770 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Thumpd3P97770 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Thumpd3P97770 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Thumpd3P97770 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC15.75■□□□□ 0.11
Thumpd3P97770 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
Thumpd3P97770 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Thumpd3P97770 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
Thumpd3P97770 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC15.75■□□□□ 0.11
Thumpd3P97770 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC15.75■□□□□ 0.11
Thumpd3P97770 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Thumpd3P97770 Arl5b-202ENSMUST00000069870 6981 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Thumpd3P97770 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Thumpd3P97770 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Thumpd3P97770 Crybg1-201ENSMUST00000020017 6608 ntAPPRIS P2 TSL 5 BASIC15.75■□□□□ 0.11
Thumpd3P97770 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
Thumpd3P97770 AC154231.1-201ENSMUST00000220564 2175 ntBASIC15.75■□□□□ 0.11
Thumpd3P97770 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
Thumpd3P97770 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
Thumpd3P97770 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Thumpd3P97770 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
Thumpd3P97770 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Thumpd3P97770 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Thumpd3P97770 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Thumpd3P97770 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Thumpd3P97770 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Thumpd3P97770 Gna13-201ENSMUST00000020930 6160 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Thumpd3P97770 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Thumpd3P97770 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
Thumpd3P97770 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Thumpd3P97770 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Thumpd3P97770 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Thumpd3P97770 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC15.74■□□□□ 0.11
Thumpd3P97770 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
Thumpd3P97770 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Thumpd3P97770 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Thumpd3P97770 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC15.74■□□□□ 0.11
Thumpd3P97770 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Thumpd3P97770 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Thumpd3P97770 Garem2-201ENSMUST00000058045 3865 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
Thumpd3P97770 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Thumpd3P97770 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC15.73■□□□□ 0.11
Thumpd3P97770 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
Thumpd3P97770 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Thumpd3P97770 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Thumpd3P97770 Gigyf1-201ENSMUST00000031727 5440 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Thumpd3P97770 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Thumpd3P97770 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Thumpd3P97770 Gm9917-201ENSMUST00000180865 5192 ntTSL 3 BASIC15.73■□□□□ 0.11
Thumpd3P97770 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Thumpd3P97770 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Thumpd3P97770 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Thumpd3P97770 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC15.73■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 32.7 ms