Protein–RNA interactions for Protein: P62311

Lsm3, U6 snRNA-associated Sm-like protein LSm3, mousemouse

Known RBP Predictions only

Length 102 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm3P62311 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Lsm3P62311 Hsph1-205ENSMUST00000201452 3140 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Lsm3P62311 Esyt1-201ENSMUST00000026427 3981 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Lsm3P62311 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Lsm3P62311 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC14.16□□□□□ -0.14
Lsm3P62311 Camk2g-217ENSMUST00000226630 1937 ntBASIC14.16□□□□□ -0.14
Lsm3P62311 Gm13186-201ENSMUST00000118031 316 ntBASIC14.16□□□□□ -0.14
Lsm3P62311 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
Lsm3P62311 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC14.16□□□□□ -0.14
Lsm3P62311 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Lsm3P62311 Scn4b-201ENSMUST00000060125 4982 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Lsm3P62311 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC14.16□□□□□ -0.14
Lsm3P62311 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Lsm3P62311 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC14.16□□□□□ -0.14
Lsm3P62311 Cdk19-202ENSMUST00000095743 3973 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Lsm3P62311 Gm43399-201ENSMUST00000202546 2374 ntBASIC14.16□□□□□ -0.14
Lsm3P62311 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Lsm3P62311 Evc-201ENSMUST00000031005 4325 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Lsm3P62311 Etv3-202ENSMUST00000119109 5309 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Lsm3P62311 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC14.15□□□□□ -0.14
Lsm3P62311 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Lsm3P62311 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Lsm3P62311 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Lsm3P62311 Tmem198b-201ENSMUST00000051011 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Lsm3P62311 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC14.15□□□□□ -0.14
Lsm3P62311 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Lsm3P62311 Camkk2-201ENSMUST00000111668 4861 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Lsm3P62311 Nupl1-207ENSMUST00000225311 2475 ntBASIC14.15□□□□□ -0.14
Lsm3P62311 Riox2-201ENSMUST00000023407 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Lsm3P62311 Wwp2-205ENSMUST00000212543 1996 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Lsm3P62311 Tle3-201ENSMUST00000034820 4646 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Lsm3P62311 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Lsm3P62311 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC14.15□□□□□ -0.14
Lsm3P62311 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC14.15□□□□□ -0.14
Lsm3P62311 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Lsm3P62311 Cep126-201ENSMUST00000037397 3819 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Lsm3P62311 Aggf1-201ENSMUST00000022189 3249 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Lsm3P62311 Grin3a-201ENSMUST00000076674 7431 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Lsm3P62311 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Lsm3P62311 Pcgf5-211ENSMUST00000225920 6443 ntBASIC14.15□□□□□ -0.14
Lsm3P62311 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Lsm3P62311 Zfp664-201ENSMUST00000111417 4092 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Lsm3P62311 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Lsm3P62311 Lrp10-201ENSMUST00000022782 4228 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Lsm3P62311 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Lsm3P62311 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Lsm3P62311 Synm-202ENSMUST00000074233 7818 ntAPPRIS P4 TSL 1 (best) BASIC14.15□□□□□ -0.14
Lsm3P62311 B3gnt7-201ENSMUST00000113306 2582 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Lsm3P62311 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC14.15□□□□□ -0.14
Lsm3P62311 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Lsm3P62311 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Lsm3P62311 Atp2b3-202ENSMUST00000088429 4483 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Lsm3P62311 Otop3-202ENSMUST00000106543 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Lsm3P62311 Gpr146-201ENSMUST00000051293 4157 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Lsm3P62311 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Lsm3P62311 Ankrd23-202ENSMUST00000193083 2277 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Lsm3P62311 Bet1l-201ENSMUST00000026557 2268 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Lsm3P62311 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC14.15□□□□□ -0.15
Lsm3P62311 Kcnh2-201ENSMUST00000036092 4221 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Lsm3P62311 Mesd-201ENSMUST00000094215 4492 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Lsm3P62311 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Lsm3P62311 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Lsm3P62311 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Lsm3P62311 Kctd14-205ENSMUST00000206279 2203 ntAPPRIS ALT2 TSL 2 BASIC14.14□□□□□ -0.15
Lsm3P62311 Atp2b3-201ENSMUST00000033744 3894 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Lsm3P62311 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Lsm3P62311 Exoc3l-201ENSMUST00000057855 2497 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Lsm3P62311 Gm10849-201ENSMUST00000100397 618 ntBASIC14.14□□□□□ -0.15
Lsm3P62311 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC14.14□□□□□ -0.15
Lsm3P62311 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC14.14□□□□□ -0.15
Lsm3P62311 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC14.14□□□□□ -0.15
Lsm3P62311 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Lsm3P62311 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC14.14□□□□□ -0.15
Lsm3P62311 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC14.14□□□□□ -0.15
Lsm3P62311 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Lsm3P62311 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Lsm3P62311 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC14.14□□□□□ -0.15
Lsm3P62311 Spg20-204ENSMUST00000118118 3981 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Lsm3P62311 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Lsm3P62311 Zbtb46-201ENSMUST00000029106 5309 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Lsm3P62311 F11r-201ENSMUST00000043839 2518 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Lsm3P62311 Pde4dip-202ENSMUST00000090750 8376 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Lsm3P62311 Fstl5-201ENSMUST00000038364 5107 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Lsm3P62311 Gm12620-201ENSMUST00000119791 1986 ntBASIC14.14□□□□□ -0.15
Lsm3P62311 Gm12612-201ENSMUST00000140182 1986 ntBASIC14.14□□□□□ -0.15
Lsm3P62311 Uhrf1bp1l-201ENSMUST00000020112 6448 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Lsm3P62311 Gm32996-201ENSMUST00000199828 1447 ntBASIC14.14□□□□□ -0.15
Lsm3P62311 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Lsm3P62311 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Lsm3P62311 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Lsm3P62311 Pgbd5-201ENSMUST00000052580 2824 ntAPPRIS P2 TSL 5 BASIC14.14□□□□□ -0.15
Lsm3P62311 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
Lsm3P62311 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Lsm3P62311 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC14.13□□□□□ -0.15
Lsm3P62311 Fhad1-202ENSMUST00000105779 4263 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Lsm3P62311 Foxred2-201ENSMUST00000016696 4793 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Lsm3P62311 B4galt3-202ENSMUST00000111313 2098 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Lsm3P62311 Fndc7-201ENSMUST00000053065 3009 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Lsm3P62311 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
Lsm3P62311 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 35.1 ms