Protein–RNA interactions for Protein: P43407

Sdc2, Syndecan-2, mousemouse

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc2P43407 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Sdc2P43407 Zfp865-201ENSMUST00000076251 7503 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Sdc2P43407 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
Sdc2P43407 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Sdc2P43407 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Sdc2P43407 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
Sdc2P43407 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Sdc2P43407 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Sdc2P43407 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Sdc2P43407 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC17.37■□□□□ 0.37
Sdc2P43407 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Sdc2P43407 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Sdc2P43407 Akt2-202ENSMUST00000085917 1392 ntTSL 5 BASIC17.37■□□□□ 0.37
Sdc2P43407 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Sdc2P43407 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Sdc2P43407 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Sdc2P43407 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Sdc2P43407 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Sdc2P43407 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
Sdc2P43407 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Sdc2P43407 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC17.37■□□□□ 0.37
Sdc2P43407 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Sdc2P43407 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Sdc2P43407 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Sdc2P43407 Gm13337-201ENSMUST00000119183 1594 ntBASIC17.36■□□□□ 0.37
Sdc2P43407 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Sdc2P43407 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Sdc2P43407 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Sdc2P43407 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Sdc2P43407 Kif21a-201ENSMUST00000067205 6307 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Sdc2P43407 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Sdc2P43407 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC17.36■□□□□ 0.37
Sdc2P43407 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Sdc2P43407 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Sdc2P43407 Gm9172-201ENSMUST00000212092 954 ntBASIC17.36■□□□□ 0.37
Sdc2P43407 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Sdc2P43407 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Sdc2P43407 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Sdc2P43407 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
Sdc2P43407 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
Sdc2P43407 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC17.36■□□□□ 0.37
Sdc2P43407 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
Sdc2P43407 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC17.36■□□□□ 0.37
Sdc2P43407 Slc25a22-201ENSMUST00000019226 2811 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Sdc2P43407 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Sdc2P43407 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Sdc2P43407 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Sdc2P43407 Smyd4-201ENSMUST00000044530 3517 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Sdc2P43407 Zfp362-201ENSMUST00000071108 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Sdc2P43407 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Sdc2P43407 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC17.35■□□□□ 0.37
Sdc2P43407 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC17.35■□□□□ 0.37
Sdc2P43407 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC17.35■□□□□ 0.37
Sdc2P43407 Arhgap44-201ENSMUST00000047463 4074 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Sdc2P43407 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Sdc2P43407 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC17.35■□□□□ 0.37
Sdc2P43407 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC17.35■□□□□ 0.37
Sdc2P43407 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Sdc2P43407 Vti1a-206ENSMUST00000225529 1244 ntBASIC17.35■□□□□ 0.37
Sdc2P43407 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Sdc2P43407 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Sdc2P43407 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Sdc2P43407 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Sdc2P43407 Tpbg-201ENSMUST00000006559 3603 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Sdc2P43407 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Sdc2P43407 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Sdc2P43407 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Sdc2P43407 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Sdc2P43407 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC17.34■□□□□ 0.37
Sdc2P43407 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Sdc2P43407 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
Sdc2P43407 Adcy1-201ENSMUST00000020706 12259 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
Sdc2P43407 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
Sdc2P43407 Gm11839-201ENSMUST00000120647 1953 ntBASIC17.34■□□□□ 0.37
Sdc2P43407 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC17.34■□□□□ 0.37
Sdc2P43407 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC17.34■□□□□ 0.37
Sdc2P43407 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC17.34■□□□□ 0.37
Sdc2P43407 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Sdc2P43407 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Sdc2P43407 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Sdc2P43407 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC17.34■□□□□ 0.37
Sdc2P43407 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Sdc2P43407 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Sdc2P43407 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC17.34■□□□□ 0.37
Sdc2P43407 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC17.34■□□□□ 0.37
Sdc2P43407 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC17.34■□□□□ 0.37
Sdc2P43407 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Sdc2P43407 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Sdc2P43407 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC17.34■□□□□ 0.37
Sdc2P43407 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Sdc2P43407 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
Sdc2P43407 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Sdc2P43407 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Sdc2P43407 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC17.33■□□□□ 0.37
Sdc2P43407 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Sdc2P43407 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Sdc2P43407 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Sdc2P43407 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Sdc2P43407 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Sdc2P43407 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC17.33■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 28.4 ms