Protein–RNA interactions for Protein: P43277

Hist1h1d, Histone H1.3, mousemouse

Known RBP Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hist1h1dP43277 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Hist1h1dP43277 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Hist1h1dP43277 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Hist1h1dP43277 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Hist1h1dP43277 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Hist1h1dP43277 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Hist1h1dP43277 Gldn-201ENSMUST00000056740 4658 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Hist1h1dP43277 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC13.1□□□□□ -0.31
Hist1h1dP43277 Furin-203ENSMUST00000122232 4286 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Hist1h1dP43277 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Hist1h1dP43277 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Hist1h1dP43277 Zfp184-202ENSMUST00000102978 3198 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Hist1h1dP43277 Sec24a-204ENSMUST00000109097 6581 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Hist1h1dP43277 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC13.09□□□□□ -0.31
Hist1h1dP43277 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Hist1h1dP43277 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Hist1h1dP43277 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Hist1h1dP43277 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
Hist1h1dP43277 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Hist1h1dP43277 Zfp212-201ENSMUST00000009411 2801 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Hist1h1dP43277 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Hist1h1dP43277 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC13.09□□□□□ -0.31
Hist1h1dP43277 Fzd6-202ENSMUST00000179165 4325 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Hist1h1dP43277 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Hist1h1dP43277 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Hist1h1dP43277 Gm13337-201ENSMUST00000119183 1594 ntBASIC13.09□□□□□ -0.31
Hist1h1dP43277 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Hist1h1dP43277 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Hist1h1dP43277 Gm9013-201ENSMUST00000132939 882 ntBASIC13.09□□□□□ -0.31
Hist1h1dP43277 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC13.09□□□□□ -0.31
Hist1h1dP43277 Gm25406-201ENSMUST00000157599 105 ntBASIC13.09□□□□□ -0.31
Hist1h1dP43277 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Hist1h1dP43277 Gm1818-201ENSMUST00000169406 1184 ntBASIC13.09□□□□□ -0.31
Hist1h1dP43277 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Hist1h1dP43277 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC13.09□□□□□ -0.31
Hist1h1dP43277 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC13.09□□□□□ -0.31
Hist1h1dP43277 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Hist1h1dP43277 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
Hist1h1dP43277 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Hist1h1dP43277 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Hist1h1dP43277 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Hist1h1dP43277 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Hist1h1dP43277 Gm37728-201ENSMUST00000195025 2292 ntBASIC13.09□□□□□ -0.31
Hist1h1dP43277 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Hist1h1dP43277 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Hist1h1dP43277 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Hist1h1dP43277 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Hist1h1dP43277 Apoa5-201ENSMUST00000034584 2312 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Hist1h1dP43277 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.31
Hist1h1dP43277 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Hist1h1dP43277 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Hist1h1dP43277 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
Hist1h1dP43277 Cand2-201ENSMUST00000075995 5474 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Hist1h1dP43277 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Hist1h1dP43277 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Hist1h1dP43277 Gm5049-201ENSMUST00000195878 1590 ntBASIC13.08□□□□□ -0.32
Hist1h1dP43277 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Hist1h1dP43277 Kcnh1-201ENSMUST00000078470 7242 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
Hist1h1dP43277 Gm5357-201ENSMUST00000212720 1924 ntBASIC13.08□□□□□ -0.32
Hist1h1dP43277 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Hist1h1dP43277 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Hist1h1dP43277 Gm6433-201ENSMUST00000118634 875 ntBASIC13.08□□□□□ -0.32
Hist1h1dP43277 Krtap5-1-202ENSMUST00000188274 742 ntBASIC13.08□□□□□ -0.32
Hist1h1dP43277 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
Hist1h1dP43277 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Hist1h1dP43277 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
Hist1h1dP43277 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Hist1h1dP43277 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Hist1h1dP43277 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Hist1h1dP43277 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Hist1h1dP43277 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
Hist1h1dP43277 Atl1-201ENSMUST00000021466 5150 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Hist1h1dP43277 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Hist1h1dP43277 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Hist1h1dP43277 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Hist1h1dP43277 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
Hist1h1dP43277 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Hist1h1dP43277 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Hist1h1dP43277 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Hist1h1dP43277 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Hist1h1dP43277 Grip2-205ENSMUST00000162300 5206 ntAPPRIS P2 TSL 5 BASIC13.07□□□□□ -0.32
Hist1h1dP43277 Abhd15-201ENSMUST00000094004 2662 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Hist1h1dP43277 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
Hist1h1dP43277 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC13.07□□□□□ -0.32
Hist1h1dP43277 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Hist1h1dP43277 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC13.07□□□□□ -0.32
Hist1h1dP43277 Nrcam-202ENSMUST00000110748 6275 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Hist1h1dP43277 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Hist1h1dP43277 Fndc3a-201ENSMUST00000089017 6143 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Hist1h1dP43277 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC13.07□□□□□ -0.32
Hist1h1dP43277 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Hist1h1dP43277 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Hist1h1dP43277 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Hist1h1dP43277 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC13.07□□□□□ -0.32
Hist1h1dP43277 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Hist1h1dP43277 AC153881.2-201ENSMUST00000214877 204 ntBASIC13.07□□□□□ -0.32
Hist1h1dP43277 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Hist1h1dP43277 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Hist1h1dP43277 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Hist1h1dP43277 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 33.2 ms