Protein–RNA interactions for Protein: P35601

Rfc1, Replication factor C subunit 1, mousemouse

Predictions only

Length 1,131 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfc1P35601 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Rfc1P35601 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Rfc1P35601 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Rfc1P35601 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Rfc1P35601 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Rfc1P35601 Kif9-204ENSMUST00000198043 2233 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Rfc1P35601 Synm-204ENSMUST00000208231 4457 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Rfc1P35601 Mfsd1-201ENSMUST00000029344 3011 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Rfc1P35601 Heatr3-201ENSMUST00000034079 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Rfc1P35601 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.21
Rfc1P35601 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Rfc1P35601 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Rfc1P35601 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Rfc1P35601 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Rfc1P35601 Wnk1-223ENSMUST00000177761 11303 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.21
Rfc1P35601 Ddhd1-202ENSMUST00000087320 9820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Rfc1P35601 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Rfc1P35601 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Rfc1P35601 Csgalnact2-201ENSMUST00000049344 3661 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Rfc1P35601 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Rfc1P35601 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC16.33■□□□□ 0.2
Rfc1P35601 Gm11539-201ENSMUST00000119837 557 ntBASIC16.33■□□□□ 0.2
Rfc1P35601 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
Rfc1P35601 Gm13436-201ENSMUST00000120418 567 ntBASIC16.33■□□□□ 0.2
Rfc1P35601 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Rfc1P35601 Gm7370-201ENSMUST00000219471 767 ntBASIC16.33■□□□□ 0.2
Rfc1P35601 Gm18115-201ENSMUST00000221209 621 ntBASIC16.33■□□□□ 0.2
Rfc1P35601 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Rfc1P35601 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Rfc1P35601 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
Rfc1P35601 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
Rfc1P35601 Prkg1-202ENSMUST00000073581 2841 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Rfc1P35601 Crem-201ENSMUST00000025069 2931 ntTSL 5 BASIC16.33■□□□□ 0.2
Rfc1P35601 Piezo1-209ENSMUST00000156333 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Rfc1P35601 Piezo1-201ENSMUST00000067252 8216 ntAPPRIS P2 TSL 5 BASIC16.33■□□□□ 0.2
Rfc1P35601 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Rfc1P35601 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Rfc1P35601 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Rfc1P35601 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
Rfc1P35601 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Rfc1P35601 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Rfc1P35601 Hps1-204ENSMUST00000160455 2952 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rfc1P35601 Prkab2-201ENSMUST00000045743 5006 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rfc1P35601 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC16.32■□□□□ 0.2
Rfc1P35601 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Rfc1P35601 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rfc1P35601 Slc25a25-203ENSMUST00000113307 2541 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rfc1P35601 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Rfc1P35601 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rfc1P35601 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC16.32■□□□□ 0.2
Rfc1P35601 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC16.32■□□□□ 0.2
Rfc1P35601 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC16.32■□□□□ 0.2
Rfc1P35601 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC16.32■□□□□ 0.2
Rfc1P35601 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC16.32■□□□□ 0.2
Rfc1P35601 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC16.32■□□□□ 0.2
Rfc1P35601 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC16.32■□□□□ 0.2
Rfc1P35601 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Rfc1P35601 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rfc1P35601 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
Rfc1P35601 Gna15-201ENSMUST00000043709 1962 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rfc1P35601 Plekha4-201ENSMUST00000051810 2660 ntAPPRIS P2 TSL 5 BASIC16.32■□□□□ 0.2
Rfc1P35601 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Rfc1P35601 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Rfc1P35601 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rfc1P35601 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rfc1P35601 Cpne1-203ENSMUST00000109608 3492 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rfc1P35601 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
Rfc1P35601 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rfc1P35601 Ntrk2-209ENSMUST00000225950 2640 ntBASIC16.32■□□□□ 0.2
Rfc1P35601 Fam189b-202ENSMUST00000117278 2593 ntTSL 5 BASIC16.32■□□□□ 0.2
Rfc1P35601 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rfc1P35601 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rfc1P35601 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rfc1P35601 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Rfc1P35601 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
Rfc1P35601 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rfc1P35601 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rfc1P35601 Zdhhc7-201ENSMUST00000034280 3069 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rfc1P35601 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Rfc1P35601 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Rfc1P35601 Gm44450-201ENSMUST00000199528 114 ntBASIC16.31■□□□□ 0.2
Rfc1P35601 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
Rfc1P35601 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rfc1P35601 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Rfc1P35601 Grip2-205ENSMUST00000162300 5206 ntAPPRIS P2 TSL 5 BASIC16.31■□□□□ 0.2
Rfc1P35601 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Rfc1P35601 Cfap45-201ENSMUST00000085894 1908 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rfc1P35601 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Rfc1P35601 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rfc1P35601 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rfc1P35601 Phactr3-203ENSMUST00000108915 2694 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Rfc1P35601 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Rfc1P35601 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rfc1P35601 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC16.3■□□□□ 0.2
Rfc1P35601 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rfc1P35601 Gigyf1-201ENSMUST00000031727 5440 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rfc1P35601 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rfc1P35601 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Rfc1P35601 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rfc1P35601 Gm5357-201ENSMUST00000212720 1924 ntBASIC16.3■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 28 ms