Protein–RNA interactions for Protein: P31648

Slc6a1, Sodium- and chloride-dependent GABA transporter 1, mousemouse

Predictions only

Length 599 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a1P31648 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC13.34□□□□□ -0.27
Slc6a1P31648 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Slc6a1P31648 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Slc6a1P31648 Adgrl1-210ENSMUST00000152978 5734 ntTSL 5 BASIC13.34□□□□□ -0.27
Slc6a1P31648 Mib1-201ENSMUST00000052838 10231 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Slc6a1P31648 Otop2-201ENSMUST00000055490 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Slc6a1P31648 Igdcc4-202ENSMUST00000077696 6361 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Slc6a1P31648 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Slc6a1P31648 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Slc6a1P31648 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Slc6a1P31648 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Slc6a1P31648 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC13.34□□□□□ -0.27
Slc6a1P31648 Kpna4-201ENSMUST00000029353 8819 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Slc6a1P31648 Gm32996-201ENSMUST00000199828 1447 ntBASIC13.34□□□□□ -0.27
Slc6a1P31648 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC13.34□□□□□ -0.27
Slc6a1P31648 Gm43353-201ENSMUST00000199224 1295 ntBASIC13.34□□□□□ -0.27
Slc6a1P31648 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Slc6a1P31648 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Slc6a1P31648 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Slc6a1P31648 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Slc6a1P31648 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Slc6a1P31648 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Slc6a1P31648 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Slc6a1P31648 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Slc6a1P31648 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Slc6a1P31648 Grip2-205ENSMUST00000162300 5206 ntAPPRIS P2 TSL 5 BASIC13.34□□□□□ -0.27
Slc6a1P31648 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Slc6a1P31648 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Slc6a1P31648 Zfp553-202ENSMUST00000106312 3342 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Slc6a1P31648 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.27
Slc6a1P31648 A330035P11Rik-202ENSMUST00000144926 3074 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
Slc6a1P31648 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
Slc6a1P31648 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Slc6a1P31648 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Slc6a1P31648 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Slc6a1P31648 Pxylp1-204ENSMUST00000120101 3189 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Slc6a1P31648 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Slc6a1P31648 Rusc1-202ENSMUST00000090929 3706 ntAPPRIS P4 TSL 1 (best) BASIC13.33□□□□□ -0.28
Slc6a1P31648 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Slc6a1P31648 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Slc6a1P31648 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Slc6a1P31648 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Slc6a1P31648 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Slc6a1P31648 Clec2h-201ENSMUST00000032518 2160 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Slc6a1P31648 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC13.33□□□□□ -0.28
Slc6a1P31648 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC13.33□□□□□ -0.28
Slc6a1P31648 Mir5130-201ENSMUST00000175160 84 ntBASIC13.33□□□□□ -0.28
Slc6a1P31648 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Slc6a1P31648 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC13.33□□□□□ -0.28
Slc6a1P31648 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC13.33□□□□□ -0.28
Slc6a1P31648 Mettl22-201ENSMUST00000046470 1825 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Slc6a1P31648 Ankhd1-214ENSMUST00000155329 8223 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Slc6a1P31648 Acot4-201ENSMUST00000021652 6203 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Slc6a1P31648 Csgalnact2-201ENSMUST00000049344 3661 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Slc6a1P31648 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Slc6a1P31648 Pank3-201ENSMUST00000018990 7376 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Slc6a1P31648 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
Slc6a1P31648 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Slc6a1P31648 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Slc6a1P31648 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Slc6a1P31648 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Slc6a1P31648 Loxl2-202ENSMUST00000100420 3042 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Slc6a1P31648 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC13.33□□□□□ -0.28
Slc6a1P31648 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Slc6a1P31648 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC13.33□□□□□ -0.28
Slc6a1P31648 Rasal3-204ENSMUST00000135618 3293 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Slc6a1P31648 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Slc6a1P31648 Cbarp-215ENSMUST00000170219 2941 ntAPPRIS P2 TSL 5 BASIC13.33□□□□□ -0.28
Slc6a1P31648 Gm6190-201ENSMUST00000220683 1374 ntBASIC13.32□□□□□ -0.28
Slc6a1P31648 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Slc6a1P31648 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Slc6a1P31648 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Slc6a1P31648 Pars2-201ENSMUST00000058905 2191 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Slc6a1P31648 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC13.32□□□□□ -0.28
Slc6a1P31648 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Slc6a1P31648 Zfp12-201ENSMUST00000032591 5265 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Slc6a1P31648 Dlg5-202ENSMUST00000073687 7784 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Slc6a1P31648 Iqsec3-201ENSMUST00000046373 6840 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Slc6a1P31648 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Slc6a1P31648 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Slc6a1P31648 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Slc6a1P31648 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Slc6a1P31648 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Slc6a1P31648 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Slc6a1P31648 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC13.32□□□□□ -0.28
Slc6a1P31648 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Slc6a1P31648 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC13.32□□□□□ -0.28
Slc6a1P31648 Gm9731-201ENSMUST00000209480 747 ntBASIC13.32□□□□□ -0.28
Slc6a1P31648 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC13.32□□□□□ -0.28
Slc6a1P31648 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC13.32□□□□□ -0.28
Slc6a1P31648 Il3ra-202ENSMUST00000223589 738 ntBASIC13.32□□□□□ -0.28
Slc6a1P31648 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Slc6a1P31648 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Slc6a1P31648 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Slc6a1P31648 Mcc-202ENSMUST00000164666 3606 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Slc6a1P31648 Gnl3-201ENSMUST00000037739 1947 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Slc6a1P31648 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Slc6a1P31648 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC13.32□□□□□ -0.28
Slc6a1P31648 Cdh11-201ENSMUST00000075190 5647 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Slc6a1P31648 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 42.6 ms