Protein–RNA interactions for Protein: P04925

Prnp, Major prion protein, mousemouse

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PrnpP04925 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
PrnpP04925 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
PrnpP04925 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC15.98■□□□□ 0.15
PrnpP04925 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
PrnpP04925 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
PrnpP04925 Thap6-204ENSMUST00000193925 1337 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
PrnpP04925 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
PrnpP04925 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
PrnpP04925 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
PrnpP04925 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
PrnpP04925 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC15.97■□□□□ 0.15
PrnpP04925 Slpi-201ENSMUST00000109367 876 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
PrnpP04925 Tpi-rs5-201ENSMUST00000216947 774 ntBASIC15.97■□□□□ 0.15
PrnpP04925 Rps10-201ENSMUST00000025052 519 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
PrnpP04925 Eef1akmt2-201ENSMUST00000033257 1107 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
PrnpP04925 Syce1l-201ENSMUST00000034219 896 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
PrnpP04925 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
PrnpP04925 Rtl8c-201ENSMUST00000063384 401 ntAPPRIS P1 BASIC15.97■□□□□ 0.15
PrnpP04925 Syce1l-202ENSMUST00000095173 791 ntAPPRIS P4 TSL 1 (best) BASIC15.97■□□□□ 0.15
PrnpP04925 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
PrnpP04925 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC15.97■□□□□ 0.15
PrnpP04925 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
PrnpP04925 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
PrnpP04925 Ap3s1-201ENSMUST00000025357 1520 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
PrnpP04925 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
PrnpP04925 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
PrnpP04925 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
PrnpP04925 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
PrnpP04925 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
PrnpP04925 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
PrnpP04925 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
PrnpP04925 Sh3bgr-201ENSMUST00000048770 1321 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
PrnpP04925 Commd10-201ENSMUST00000049388 1561 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
PrnpP04925 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
PrnpP04925 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC15.96■□□□□ 0.15
PrnpP04925 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
PrnpP04925 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
PrnpP04925 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
PrnpP04925 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC15.96■□□□□ 0.15
PrnpP04925 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
PrnpP04925 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
PrnpP04925 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
PrnpP04925 Hist1h3e-201ENSMUST00000105107 836 ntAPPRIS P1 BASIC15.96■□□□□ 0.15
PrnpP04925 Ppil3-203ENSMUST00000114348 1033 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
PrnpP04925 Serpinf1-202ENSMUST00000125982 605 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
PrnpP04925 4930544D05Rik-203ENSMUST00000144960 624 ntAPPRIS P2 TSL 5 BASIC15.96■□□□□ 0.15
PrnpP04925 Hsf4-207ENSMUST00000174837 1251 ntTSL 5 BASIC15.96■□□□□ 0.15
PrnpP04925 Gm20661-203ENSMUST00000177368 900 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
PrnpP04925 Mrpl4-201ENSMUST00000003386 1288 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
PrnpP04925 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC15.96■□□□□ 0.15
PrnpP04925 Krtap19-4-201ENSMUST00000051103 304 ntAPPRIS P1 BASIC15.96■□□□□ 0.15
PrnpP04925 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC15.96■□□□□ 0.15
PrnpP04925 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC15.96■□□□□ 0.15
PrnpP04925 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
PrnpP04925 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
PrnpP04925 Gstm7-201ENSMUST00000004137 1377 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
PrnpP04925 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
PrnpP04925 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC15.96■□□□□ 0.15
PrnpP04925 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
PrnpP04925 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
PrnpP04925 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.14
PrnpP04925 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
PrnpP04925 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
PrnpP04925 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
PrnpP04925 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC15.95■□□□□ 0.14
PrnpP04925 Ppp1r1a-201ENSMUST00000023133 1306 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
PrnpP04925 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
PrnpP04925 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC15.95■□□□□ 0.14
PrnpP04925 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
PrnpP04925 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
PrnpP04925 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
PrnpP04925 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
PrnpP04925 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
PrnpP04925 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
PrnpP04925 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
PrnpP04925 Brwd3-202ENSMUST00000101283 1066 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
PrnpP04925 Dnajc8-205ENSMUST00000105939 746 ntTSL 5 BASIC15.95■□□□□ 0.14
PrnpP04925 Med22-201ENSMUST00000015920 973 ntAPPRIS P4 TSL 2 BASIC15.95■□□□□ 0.14
PrnpP04925 G430095P16Rik-201ENSMUST00000098571 721 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
PrnpP04925 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
PrnpP04925 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
PrnpP04925 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
PrnpP04925 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
PrnpP04925 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
PrnpP04925 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
PrnpP04925 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
PrnpP04925 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
PrnpP04925 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC15.95■□□□□ 0.14
PrnpP04925 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
PrnpP04925 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC15.94■□□□□ 0.14
PrnpP04925 Rogdi-201ENSMUST00000023191 1431 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
PrnpP04925 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
PrnpP04925 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
PrnpP04925 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC15.94■□□□□ 0.14
PrnpP04925 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC15.94■□□□□ 0.14
PrnpP04925 Gm6973-201ENSMUST00000117080 721 ntBASIC15.94■□□□□ 0.14
PrnpP04925 Abhd11os-201ENSMUST00000136022 604 ntTSL 2 BASIC15.94■□□□□ 0.14
PrnpP04925 Gm13883-202ENSMUST00000151310 1156 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
PrnpP04925 Tex12-201ENSMUST00000034568 895 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
PrnpP04925 Dnal1-201ENSMUST00000046340 790 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Retrieved 100 of 76,532 protein–RNA pairs in 39 ms