Protein–RNA interactions for Protein: O70309

Itgb5, Integrin beta-5, mousemouse

Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Itgb5O70309 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Itgb5O70309 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Itgb5O70309 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Itgb5O70309 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Itgb5O70309 Dancr-204ENSMUST00000132389 2347 ntBASIC17.08■□□□□ 0.33
Itgb5O70309 AC069562.2-201ENSMUST00000224644 2146 ntBASIC17.08■□□□□ 0.33
Itgb5O70309 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.33
Itgb5O70309 Ccdc42-203ENSMUST00000154294 1384 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
Itgb5O70309 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Itgb5O70309 Gm6226-201ENSMUST00000117765 1146 ntBASIC17.08■□□□□ 0.32
Itgb5O70309 Gm16198-201ENSMUST00000118766 670 ntBASIC17.08■□□□□ 0.32
Itgb5O70309 Gm11508-201ENSMUST00000129337 440 ntTSL 2 BASIC17.08■□□□□ 0.32
Itgb5O70309 Bnipl-204ENSMUST00000137250 1251 ntTSL 5 BASIC17.08■□□□□ 0.32
Itgb5O70309 Gssos1-201ENSMUST00000142509 716 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Itgb5O70309 Med11-202ENSMUST00000151013 445 ntTSL 2 BASIC17.08■□□□□ 0.32
Itgb5O70309 AC124549.3-201ENSMUST00000225541 367 ntBASIC17.08■□□□□ 0.32
Itgb5O70309 Mt3-201ENSMUST00000034211 536 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Itgb5O70309 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Itgb5O70309 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Itgb5O70309 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Itgb5O70309 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Itgb5O70309 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Itgb5O70309 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Itgb5O70309 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC17.07■□□□□ 0.32
Itgb5O70309 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Itgb5O70309 AC093043.3-201ENSMUST00000226531 2273 ntBASIC17.07■□□□□ 0.32
Itgb5O70309 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC17.07■□□□□ 0.32
Itgb5O70309 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Itgb5O70309 Gm9385-201ENSMUST00000117563 472 ntBASIC17.07■□□□□ 0.32
Itgb5O70309 Gm20553-201ENSMUST00000204205 844 ntBASIC17.07■□□□□ 0.32
Itgb5O70309 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Itgb5O70309 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Itgb5O70309 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC17.07■□□□□ 0.32
Itgb5O70309 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Itgb5O70309 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Itgb5O70309 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Itgb5O70309 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Itgb5O70309 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Itgb5O70309 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Itgb5O70309 Slc39a14-201ENSMUST00000022688 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Itgb5O70309 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Itgb5O70309 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Itgb5O70309 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Itgb5O70309 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Itgb5O70309 Mef2b-204ENSMUST00000110146 1342 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
Itgb5O70309 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Itgb5O70309 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
Itgb5O70309 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC17.06■□□□□ 0.32
Itgb5O70309 Gm11795-201ENSMUST00000127180 396 ntTSL 5 BASIC17.06■□□□□ 0.32
Itgb5O70309 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Itgb5O70309 Gm26308-201ENSMUST00000157768 69 ntBASIC17.06■□□□□ 0.32
Itgb5O70309 Thap4-205ENSMUST00000189728 713 ntTSL 2 BASIC17.06■□□□□ 0.32
Itgb5O70309 Cldn25-ps-201ENSMUST00000197641 693 ntBASIC17.06■□□□□ 0.32
Itgb5O70309 AC155252.2-201ENSMUST00000226946 680 ntBASIC17.06■□□□□ 0.32
Itgb5O70309 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Itgb5O70309 Gm9945-201ENSMUST00000067523 932 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
Itgb5O70309 Gm45412-201ENSMUST00000210217 2275 ntBASIC17.06■□□□□ 0.32
Itgb5O70309 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Itgb5O70309 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC17.06■□□□□ 0.32
Itgb5O70309 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
Itgb5O70309 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Itgb5O70309 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Itgb5O70309 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Itgb5O70309 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Itgb5O70309 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Itgb5O70309 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Itgb5O70309 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Itgb5O70309 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Itgb5O70309 Gm21984-201ENSMUST00000123117 822 ntTSL 5 BASIC17.05■□□□□ 0.32
Itgb5O70309 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC17.05■□□□□ 0.32
Itgb5O70309 Gm45612-201ENSMUST00000211320 160 ntBASIC17.05■□□□□ 0.32
Itgb5O70309 Lce1f-201ENSMUST00000047153 728 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Itgb5O70309 Pdlim4-202ENSMUST00000093109 962 ntTSL 5 BASIC17.05■□□□□ 0.32
Itgb5O70309 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Itgb5O70309 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Itgb5O70309 AC163637.1-201ENSMUST00000215491 1894 ntBASIC17.05■□□□□ 0.32
Itgb5O70309 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Itgb5O70309 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Itgb5O70309 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
Itgb5O70309 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Itgb5O70309 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Itgb5O70309 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Itgb5O70309 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Itgb5O70309 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC17.04■□□□□ 0.32
Itgb5O70309 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Itgb5O70309 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC17.04■□□□□ 0.32
Itgb5O70309 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Itgb5O70309 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
Itgb5O70309 Ager-209ENSMUST00000174496 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Itgb5O70309 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Itgb5O70309 Etfrf1-204ENSMUST00000111723 842 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Itgb5O70309 Bad-203ENSMUST00000113426 740 ntTSL 5 BASIC17.04■□□□□ 0.32
Itgb5O70309 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Itgb5O70309 Ftl1-ps1-202ENSMUST00000222435 938 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
Itgb5O70309 Emg1-201ENSMUST00000004379 1034 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Itgb5O70309 Cyp2d40-201ENSMUST00000055721 1161 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Itgb5O70309 Gtpbp10-201ENSMUST00000088842 941 ntTSL 5 BASIC17.04■□□□□ 0.32
Itgb5O70309 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC17.04■□□□□ 0.32
Itgb5O70309 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Itgb5O70309 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 28.6 ms