Protein–RNA interactions for Protein: O55057

Pde6d, Retinal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit delta, mousemouse

Predictions only

Length 150 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pde6dO55057 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Pde6dO55057 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
Pde6dO55057 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Pde6dO55057 Mink1-203ENSMUST00000079244 4829 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Pde6dO55057 Gm43399-201ENSMUST00000202546 2374 ntBASIC12.23□□□□□ -0.45
Pde6dO55057 Apoa5-201ENSMUST00000034584 2312 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Pde6dO55057 Kif17-201ENSMUST00000030539 3453 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Pde6dO55057 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Pde6dO55057 Evc-201ENSMUST00000031005 4325 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Pde6dO55057 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Pde6dO55057 3110082I17Rik-204ENSMUST00000198474 2030 ntTSL 2 BASIC12.23□□□□□ -0.45
Pde6dO55057 Pcdha1-202ENSMUST00000193839 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Pde6dO55057 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC12.23□□□□□ -0.45
Pde6dO55057 Fam169b-202ENSMUST00000125685 2821 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Pde6dO55057 Klk7-201ENSMUST00000032955 1895 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Pde6dO55057 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Pde6dO55057 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC12.23□□□□□ -0.45
Pde6dO55057 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC12.23□□□□□ -0.45
Pde6dO55057 Slc4a4-207ENSMUST00000148750 7931 ntAPPRIS P3 TSL 5 BASIC12.23□□□□□ -0.45
Pde6dO55057 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Pde6dO55057 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Pde6dO55057 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Pde6dO55057 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pde6dO55057 Espn-220ENSMUST00000207676 4618 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Pde6dO55057 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Pde6dO55057 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pde6dO55057 Nrap-201ENSMUST00000040711 5334 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pde6dO55057 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pde6dO55057 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pde6dO55057 Ikzf1-204ENSMUST00000076700 5163 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pde6dO55057 Gm43859-201ENSMUST00000200075 1412 ntBASIC12.22□□□□□ -0.45
Pde6dO55057 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pde6dO55057 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pde6dO55057 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Pde6dO55057 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pde6dO55057 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Pde6dO55057 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Pde6dO55057 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC12.22□□□□□ -0.45
Pde6dO55057 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC12.22□□□□□ -0.45
Pde6dO55057 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pde6dO55057 Ccdc157-201ENSMUST00000093381 5015 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pde6dO55057 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Pde6dO55057 Fgfr3-210ENSMUST00000169212 4245 ntAPPRIS P4 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pde6dO55057 Olfr718-ps1-202ENSMUST00000213631 4737 ntAPPRIS P5 TSL 5 BASIC12.22□□□□□ -0.45
Pde6dO55057 Fam174a-202ENSMUST00000186780 3460 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pde6dO55057 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pde6dO55057 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pde6dO55057 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Pde6dO55057 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pde6dO55057 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC12.21□□□□□ -0.45
Pde6dO55057 Endov-202ENSMUST00000106244 5070 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Pde6dO55057 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.45
Pde6dO55057 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Pde6dO55057 Camkk2-201ENSMUST00000111668 4861 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Pde6dO55057 Camk2g-217ENSMUST00000226630 1937 ntBASIC12.21□□□□□ -0.45
Pde6dO55057 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Pde6dO55057 Tmem198b-201ENSMUST00000051011 2335 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Pde6dO55057 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Pde6dO55057 Dmtn-202ENSMUST00000022695 4080 ntTSL 5 BASIC12.21□□□□□ -0.45
Pde6dO55057 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Pde6dO55057 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Pde6dO55057 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC12.21□□□□□ -0.45
Pde6dO55057 Lurap1l-201ENSMUST00000055922 3066 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Pde6dO55057 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Pde6dO55057 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Pde6dO55057 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Pde6dO55057 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC12.21□□□□□ -0.45
Pde6dO55057 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Pde6dO55057 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC12.21□□□□□ -0.45
Pde6dO55057 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Pde6dO55057 Gng2-204ENSMUST00000160013 3826 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Pde6dO55057 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Pde6dO55057 Gm3807-201ENSMUST00000193520 1168 ntBASIC12.21□□□□□ -0.45
Pde6dO55057 Gm7791-201ENSMUST00000219066 539 ntBASIC12.21□□□□□ -0.45
Pde6dO55057 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Pde6dO55057 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Pde6dO55057 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Pde6dO55057 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Pde6dO55057 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Pde6dO55057 Lifr-201ENSMUST00000067190 4143 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
Pde6dO55057 Cflar-204ENSMUST00000114309 2010 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Pde6dO55057 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.46
Pde6dO55057 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Pde6dO55057 Gm4756-202ENSMUST00000208039 2344 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.46
Pde6dO55057 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC12.21□□□□□ -0.46
Pde6dO55057 Dlg1-201ENSMUST00000023454 3725 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Pde6dO55057 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Pde6dO55057 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC12.2□□□□□ -0.46
Pde6dO55057 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC12.2□□□□□ -0.46
Pde6dO55057 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Pde6dO55057 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Pde6dO55057 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC12.2□□□□□ -0.46
Pde6dO55057 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Pde6dO55057 Entpd5-204ENSMUST00000117286 1691 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Pde6dO55057 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Pde6dO55057 Anks1b-205ENSMUST00000179694 2663 ntTSL 5 BASIC12.2□□□□□ -0.46
Pde6dO55057 Sacs-201ENSMUST00000089394 3345 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Pde6dO55057 Plch2-210ENSMUST00000176194 5619 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Pde6dO55057 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Pde6dO55057 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 26.7 ms