Protein–RNA interactions for Protein: O55055

Trdmt1, tRNA (cytosine(38)-C(5))-methyltransferase, mousemouse

Predictions only

Length 415 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trdmt1O55055 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trdmt1O55055 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC16.97■□□□□ 0.31
Trdmt1O55055 AC154767.3-201ENSMUST00000225150 1342 ntBASIC16.96■□□□□ 0.31
Trdmt1O55055 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Trdmt1O55055 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Trdmt1O55055 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC16.96■□□□□ 0.31
Trdmt1O55055 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC16.96■□□□□ 0.31
Trdmt1O55055 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Trdmt1O55055 Eef1akmt4-201ENSMUST00000115522 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Trdmt1O55055 Chchd7-208ENSMUST00000121651 620 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Trdmt1O55055 Gpx4-207ENSMUST00000183037 735 ntTSL 2 BASIC16.96■□□□□ 0.31
Trdmt1O55055 Gm30191-201ENSMUST00000205501 647 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
Trdmt1O55055 AC166341.4-201ENSMUST00000220625 123 ntBASIC16.96■□□□□ 0.31
Trdmt1O55055 Syce1l-201ENSMUST00000034219 896 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Trdmt1O55055 Tex12-201ENSMUST00000034568 895 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Trdmt1O55055 Chchd7-201ENSMUST00000041122 672 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Trdmt1O55055 Syce1l-202ENSMUST00000095173 791 ntAPPRIS P4 TSL 1 (best) BASIC16.96■□□□□ 0.31
Trdmt1O55055 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Trdmt1O55055 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Trdmt1O55055 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Trdmt1O55055 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC16.96■□□□□ 0.3
Trdmt1O55055 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Trdmt1O55055 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Trdmt1O55055 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC16.96■□□□□ 0.3
Trdmt1O55055 Osr2-201ENSMUST00000022952 1724 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
Trdmt1O55055 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Trdmt1O55055 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Trdmt1O55055 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trdmt1O55055 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trdmt1O55055 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trdmt1O55055 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC16.95■□□□□ 0.3
Trdmt1O55055 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trdmt1O55055 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trdmt1O55055 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trdmt1O55055 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trdmt1O55055 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trdmt1O55055 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Trdmt1O55055 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trdmt1O55055 Mrto4-202ENSMUST00000102503 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trdmt1O55055 Tex22-202ENSMUST00000109729 735 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trdmt1O55055 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Trdmt1O55055 Gm13883-202ENSMUST00000151310 1156 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Trdmt1O55055 Gm27622-201ENSMUST00000183779 60 ntBASIC16.95■□□□□ 0.3
Trdmt1O55055 Gm28277-201ENSMUST00000187450 885 ntTSL 3 BASIC16.95■□□□□ 0.3
Trdmt1O55055 Gm35911-201ENSMUST00000198837 677 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
Trdmt1O55055 Gm38554-201ENSMUST00000201639 708 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Trdmt1O55055 Gm34964-201ENSMUST00000207398 417 ntTSL 5 BASIC16.95■□□□□ 0.3
Trdmt1O55055 Gm5779-201ENSMUST00000218467 910 ntBASIC16.95■□□□□ 0.3
Trdmt1O55055 AC126408.1-201ENSMUST00000225184 523 ntBASIC16.95■□□□□ 0.3
Trdmt1O55055 Gm45293-201ENSMUST00000209754 1812 ntBASIC16.95■□□□□ 0.3
Trdmt1O55055 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trdmt1O55055 Ntrk2-205ENSMUST00000224402 2284 ntBASIC16.95■□□□□ 0.3
Trdmt1O55055 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trdmt1O55055 Hmgb3-201ENSMUST00000015361 1544 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trdmt1O55055 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC16.95■□□□□ 0.3
Trdmt1O55055 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
Trdmt1O55055 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trdmt1O55055 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Trdmt1O55055 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC16.94■□□□□ 0.3
Trdmt1O55055 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trdmt1O55055 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trdmt1O55055 Sebox-201ENSMUST00000001130 1351 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trdmt1O55055 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
Trdmt1O55055 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC16.94■□□□□ 0.3
Trdmt1O55055 Gm14104-201ENSMUST00000135990 356 ntTSL 5 BASIC16.94■□□□□ 0.3
Trdmt1O55055 Olfr1344-201ENSMUST00000168341 1061 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
Trdmt1O55055 Styxl1-207ENSMUST00000177559 1236 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
Trdmt1O55055 Gm26771-201ENSMUST00000180472 1082 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Trdmt1O55055 Gzma-201ENSMUST00000023897 878 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trdmt1O55055 Atad3aos-201ENSMUST00000067628 971 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Trdmt1O55055 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trdmt1O55055 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trdmt1O55055 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trdmt1O55055 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Trdmt1O55055 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trdmt1O55055 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trdmt1O55055 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trdmt1O55055 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trdmt1O55055 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trdmt1O55055 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
Trdmt1O55055 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Trdmt1O55055 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Trdmt1O55055 Gm42893-201ENSMUST00000198035 1502 ntTSL 3 BASIC16.93■□□□□ 0.3
Trdmt1O55055 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC16.93■□□□□ 0.3
Trdmt1O55055 Med22-201ENSMUST00000015920 973 ntAPPRIS P4 TSL 2 BASIC16.93■□□□□ 0.3
Trdmt1O55055 Gm16026-204ENSMUST00000162652 683 ntBASIC16.93■□□□□ 0.3
Trdmt1O55055 Gm10044-204ENSMUST00000170177 659 ntTSL 3 BASIC16.93■□□□□ 0.3
Trdmt1O55055 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
Trdmt1O55055 Wdyhv1-206ENSMUST00000227142 786 ntBASIC16.93■□□□□ 0.3
Trdmt1O55055 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trdmt1O55055 Sbk2-205ENSMUST00000208109 1422 ntTSL 5 BASIC16.93■□□□□ 0.3
Trdmt1O55055 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trdmt1O55055 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trdmt1O55055 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trdmt1O55055 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trdmt1O55055 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
Trdmt1O55055 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trdmt1O55055 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trdmt1O55055 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trdmt1O55055 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 31.1 ms