Protein–RNA interactions for Protein: O54982

Kcnu1, Potassium channel subfamily U member 1, mousemouse

Predictions only

Length 1,121 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Kcnu1O54982 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
Kcnu1O54982 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Kcnu1O54982 Gm14722-201ENSMUST00000118943 689 ntBASIC16.47■□□□□ 0.23
Kcnu1O54982 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC16.47■□□□□ 0.23
Kcnu1O54982 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC16.47■□□□□ 0.23
Kcnu1O54982 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC16.47■□□□□ 0.23
Kcnu1O54982 AC158538.2-201ENSMUST00000225455 906 ntBASIC16.47■□□□□ 0.23
Kcnu1O54982 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Kcnu1O54982 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Kcnu1O54982 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Kcnu1O54982 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Kcnu1O54982 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
Kcnu1O54982 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Kcnu1O54982 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Kcnu1O54982 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC16.47■□□□□ 0.23
Kcnu1O54982 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Kcnu1O54982 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
Kcnu1O54982 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC16.47■□□□□ 0.23
Kcnu1O54982 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Kcnu1O54982 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC16.47■□□□□ 0.23
Kcnu1O54982 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Kcnu1O54982 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Kcnu1O54982 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
Kcnu1O54982 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Kcnu1O54982 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC16.46■□□□□ 0.23
Kcnu1O54982 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
Kcnu1O54982 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Kcnu1O54982 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC16.46■□□□□ 0.23
Kcnu1O54982 Gm8344-201ENSMUST00000119813 856 ntBASIC16.46■□□□□ 0.23
Kcnu1O54982 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Kcnu1O54982 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC16.46■□□□□ 0.23
Kcnu1O54982 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC16.46■□□□□ 0.23
Kcnu1O54982 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC16.46■□□□□ 0.23
Kcnu1O54982 AC160338.1-201ENSMUST00000214232 705 ntBASIC16.46■□□□□ 0.23
Kcnu1O54982 Gm18669-201ENSMUST00000216049 778 ntBASIC16.46■□□□□ 0.23
Kcnu1O54982 Gm8655-201ENSMUST00000221159 852 ntBASIC16.46■□□□□ 0.23
Kcnu1O54982 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Kcnu1O54982 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Kcnu1O54982 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Kcnu1O54982 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Kcnu1O54982 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC16.46■□□□□ 0.23
Kcnu1O54982 Gm13034-201ENSMUST00000121342 3177 ntBASIC16.46■□□□□ 0.22
Kcnu1O54982 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.22
Kcnu1O54982 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Kcnu1O54982 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Kcnu1O54982 Ano10-201ENSMUST00000042546 2653 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Kcnu1O54982 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Kcnu1O54982 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC16.45■□□□□ 0.22
Kcnu1O54982 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Kcnu1O54982 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Kcnu1O54982 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC16.45■□□□□ 0.22
Kcnu1O54982 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC16.45■□□□□ 0.22
Kcnu1O54982 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
Kcnu1O54982 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
Kcnu1O54982 Gm5837-201ENSMUST00000191844 1369 ntBASIC16.45■□□□□ 0.22
Kcnu1O54982 Sybu-209ENSMUST00000228639 4113 ntBASIC16.45■□□□□ 0.22
Kcnu1O54982 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Kcnu1O54982 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Kcnu1O54982 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
Kcnu1O54982 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC16.45■□□□□ 0.22
Kcnu1O54982 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Kcnu1O54982 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Kcnu1O54982 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Kcnu1O54982 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Kcnu1O54982 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Kcnu1O54982 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Kcnu1O54982 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Kcnu1O54982 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC16.44■□□□□ 0.22
Kcnu1O54982 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Kcnu1O54982 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Kcnu1O54982 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Kcnu1O54982 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Kcnu1O54982 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Kcnu1O54982 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Kcnu1O54982 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Kcnu1O54982 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Kcnu1O54982 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC16.44■□□□□ 0.22
Kcnu1O54982 Gm7286-201ENSMUST00000182691 1007 ntBASIC16.44■□□□□ 0.22
Kcnu1O54982 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC16.44■□□□□ 0.22
Kcnu1O54982 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
Kcnu1O54982 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Kcnu1O54982 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Kcnu1O54982 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC16.44■□□□□ 0.22
Kcnu1O54982 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Kcnu1O54982 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
Kcnu1O54982 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
Kcnu1O54982 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Kcnu1O54982 Gm5421-201ENSMUST00000181698 2354 ntBASIC16.44■□□□□ 0.22
Kcnu1O54982 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Kcnu1O54982 Zkscan3-208ENSMUST00000224820 5398 ntBASIC16.44■□□□□ 0.22
Kcnu1O54982 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
Kcnu1O54982 Smyd4-201ENSMUST00000044530 3517 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Kcnu1O54982 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC16.43■□□□□ 0.22
Kcnu1O54982 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Kcnu1O54982 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC16.43■□□□□ 0.22
Kcnu1O54982 Gpam-201ENSMUST00000061856 3832 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Kcnu1O54982 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Kcnu1O54982 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC16.43■□□□□ 0.22
Kcnu1O54982 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
Kcnu1O54982 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 70.8 ms