Protein–RNA interactions for Protein: O54689

Ccr6, C-C chemokine receptor type 6, mousemouse

Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccr6O54689 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Ccr6O54689 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC13□□□□□ -0.33
Ccr6O54689 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC13□□□□□ -0.33
Ccr6O54689 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Ccr6O54689 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Ccr6O54689 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Ccr6O54689 Srsf10-204ENSMUST00000105853 3058 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Ccr6O54689 Mbtps2-201ENSMUST00000058098 4797 ntTSL 1 (best) BASIC13□□□□□ -0.33
Ccr6O54689 Sesn1-201ENSMUST00000041438 2600 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Ccr6O54689 B3gnt7-201ENSMUST00000113306 2582 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Ccr6O54689 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Ccr6O54689 Cpeb2-205ENSMUST00000169035 7050 ntAPPRIS P2 TSL 5 BASIC13□□□□□ -0.33
Ccr6O54689 AC162938.1-201ENSMUST00000213140 2323 ntBASIC13□□□□□ -0.33
Ccr6O54689 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Ccr6O54689 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC13□□□□□ -0.33
Ccr6O54689 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Ccr6O54689 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Ccr6O54689 Gm38318-201ENSMUST00000195769 1706 ntBASIC12.99□□□□□ -0.33
Ccr6O54689 Gm10710-201ENSMUST00000047876 3971 ntBASIC12.99□□□□□ -0.33
Ccr6O54689 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Ccr6O54689 Ism2-202ENSMUST00000125733 2526 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Ccr6O54689 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Ccr6O54689 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Ccr6O54689 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Ccr6O54689 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC12.99□□□□□ -0.33
Ccr6O54689 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Ccr6O54689 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Ccr6O54689 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC12.99□□□□□ -0.33
Ccr6O54689 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
Ccr6O54689 Socs7-201ENSMUST00000045540 7015 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ccr6O54689 Pcdha1-201ENSMUST00000070797 5248 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ccr6O54689 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC12.99□□□□□ -0.33
Ccr6O54689 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Ccr6O54689 Ppp1r1b-206ENSMUST00000150762 1801 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Ccr6O54689 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ccr6O54689 Fars2-208ENSMUST00000224611 1750 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
Ccr6O54689 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ccr6O54689 Ss18-201ENSMUST00000040924 3090 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ccr6O54689 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ccr6O54689 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC12.98□□□□□ -0.33
Ccr6O54689 Gm26578-201ENSMUST00000181702 4611 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Ccr6O54689 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ccr6O54689 Bbs7-203ENSMUST00000108156 2687 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ccr6O54689 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Ccr6O54689 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ccr6O54689 Pxylp1-204ENSMUST00000120101 3189 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ccr6O54689 Midn-201ENSMUST00000042057 3727 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ccr6O54689 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ccr6O54689 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ccr6O54689 Cpeb3-201ENSMUST00000079754 5899 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ccr6O54689 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Ccr6O54689 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ccr6O54689 Gspt2-201ENSMUST00000096368 2491 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
Ccr6O54689 Sema3b-201ENSMUST00000073448 2987 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ccr6O54689 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ccr6O54689 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ccr6O54689 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC12.98□□□□□ -0.33
Ccr6O54689 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC12.98□□□□□ -0.33
Ccr6O54689 Gm7370-201ENSMUST00000219471 767 ntBASIC12.98□□□□□ -0.33
Ccr6O54689 Odf3b-204ENSMUST00000227834 930 ntBASIC12.98□□□□□ -0.33
Ccr6O54689 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ccr6O54689 Mapt-203ENSMUST00000106989 2250 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Ccr6O54689 Slc17a9-201ENSMUST00000094218 2275 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Ccr6O54689 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ccr6O54689 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ccr6O54689 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ccr6O54689 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ccr6O54689 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ccr6O54689 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC12.98□□□□□ -0.33
Ccr6O54689 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ccr6O54689 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ccr6O54689 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Ccr6O54689 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Ccr6O54689 Arpin-201ENSMUST00000048731 2277 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ccr6O54689 Csnk1g2-202ENSMUST00000085435 1825 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ccr6O54689 Prkcsh-205ENSMUST00000216344 2228 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ccr6O54689 Elovl6-205ENSMUST00000199910 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ccr6O54689 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Ccr6O54689 Pcyt1a-202ENSMUST00000104893 4951 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Ccr6O54689 2410018L13Rik-205ENSMUST00000149246 3370 ntTSL 2 BASIC12.97□□□□□ -0.33
Ccr6O54689 Gm9856-201ENSMUST00000217077 2578 ntBASIC12.97□□□□□ -0.33
Ccr6O54689 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ccr6O54689 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ccr6O54689 Rasal3-204ENSMUST00000135618 3293 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Ccr6O54689 Mib2-201ENSMUST00000103176 3642 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ccr6O54689 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Ccr6O54689 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC12.97□□□□□ -0.33
Ccr6O54689 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ccr6O54689 Lurap1-201ENSMUST00000030469 5742 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ccr6O54689 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ccr6O54689 Cpne1-203ENSMUST00000109608 3492 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ccr6O54689 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Ccr6O54689 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ccr6O54689 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
Ccr6O54689 Gm4217-201ENSMUST00000182243 1002 ntBASIC12.97□□□□□ -0.33
Ccr6O54689 Gm37179-201ENSMUST00000194862 823 ntBASIC12.97□□□□□ -0.33
Ccr6O54689 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC12.97□□□□□ -0.33
Ccr6O54689 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ccr6O54689 Zcchc3-201ENSMUST00000099207 3073 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
Ccr6O54689 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 20.6 ms