Protein–RNA interactions for Protein: G3UXB3

Nkx1-1, NK1 homeobox 1, mousemouse

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx1-1G3UXB3 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.43
Nkx1-1G3UXB3 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Nkx1-1G3UXB3 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Nkx1-1G3UXB3 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Nkx1-1G3UXB3 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Nkx1-1G3UXB3 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC17.76■□□□□ 0.43
Nkx1-1G3UXB3 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Nkx1-1G3UXB3 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC17.76■□□□□ 0.43
Nkx1-1G3UXB3 Gm16976-201ENSMUST00000099718 1894 ntTSL 5 BASIC17.76■□□□□ 0.43
Nkx1-1G3UXB3 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Nkx1-1G3UXB3 Actl7b-201ENSMUST00000095080 1439 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
Nkx1-1G3UXB3 Mir466f-3-201ENSMUST00000104788 94 ntBASIC17.76■□□□□ 0.43
Nkx1-1G3UXB3 Mir1247-201ENSMUST00000116706 82 ntBASIC17.76■□□□□ 0.43
Nkx1-1G3UXB3 Fzr1-202ENSMUST00000118812 1215 ntTSL 5 BASIC17.76■□□□□ 0.43
Nkx1-1G3UXB3 Mrps18c-201ENSMUST00000016977 638 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Nkx1-1G3UXB3 Tgif2-ps1-201ENSMUST00000203590 713 ntBASIC17.76■□□□□ 0.43
Nkx1-1G3UXB3 Gm44200-201ENSMUST00000204883 662 ntTSL 5 BASIC17.76■□□□□ 0.43
Nkx1-1G3UXB3 Fxyd1-217ENSMUST00000206860 594 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
Nkx1-1G3UXB3 AC129017.2-201ENSMUST00000226118 1284 ntBASIC17.76■□□□□ 0.43
Nkx1-1G3UXB3 Ifitm3-201ENSMUST00000026565 678 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Nkx1-1G3UXB3 Magoh-201ENSMUST00000030348 692 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Nkx1-1G3UXB3 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
Nkx1-1G3UXB3 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Nkx1-1G3UXB3 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Nkx1-1G3UXB3 Coq6-203ENSMUST00000110278 1354 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
Nkx1-1G3UXB3 Cyp21a2-ps-201ENSMUST00000172970 1383 ntBASIC17.76■□□□□ 0.43
Nkx1-1G3UXB3 CT010447.1-201ENSMUST00000225657 1608 ntBASIC17.76■□□□□ 0.43
Nkx1-1G3UXB3 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Nkx1-1G3UXB3 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
Nkx1-1G3UXB3 Olfr114-203ENSMUST00000216249 1457 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
Nkx1-1G3UXB3 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Nkx1-1G3UXB3 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Nkx1-1G3UXB3 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
Nkx1-1G3UXB3 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC17.75■□□□□ 0.43
Nkx1-1G3UXB3 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Nkx1-1G3UXB3 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC17.75■□□□□ 0.43
Nkx1-1G3UXB3 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Nkx1-1G3UXB3 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
Nkx1-1G3UXB3 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
Nkx1-1G3UXB3 Rgs20-203ENSMUST00000119256 883 ntAPPRIS ALT2 TSL 3 BASIC17.75■□□□□ 0.43
Nkx1-1G3UXB3 Gm15384-201ENSMUST00000138832 486 ntTSL 5 BASIC17.75■□□□□ 0.43
Nkx1-1G3UXB3 Gm15940-201ENSMUST00000156011 817 ntTSL 3 BASIC17.75■□□□□ 0.43
Nkx1-1G3UXB3 C730036E19Rik-201ENSMUST00000188305 1102 ntTSL 5 BASIC17.75■□□□□ 0.43
Nkx1-1G3UXB3 Lcmt1-204ENSMUST00000206574 1286 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
Nkx1-1G3UXB3 Mdk-201ENSMUST00000028672 1054 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Nkx1-1G3UXB3 1700020A23Rik-201ENSMUST00000028898 712 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Nkx1-1G3UXB3 Lce3a-201ENSMUST00000067318 549 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Nkx1-1G3UXB3 Rhox9-201ENSMUST00000089062 882 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Nkx1-1G3UXB3 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC17.75■□□□□ 0.43
Nkx1-1G3UXB3 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Nkx1-1G3UXB3 Gm29361-201ENSMUST00000183323 2000 ntBASIC17.75■□□□□ 0.43
Nkx1-1G3UXB3 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Nkx1-1G3UXB3 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Nkx1-1G3UXB3 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC17.75■□□□□ 0.43
Nkx1-1G3UXB3 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Nkx1-1G3UXB3 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Nkx1-1G3UXB3 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Nkx1-1G3UXB3 Cnbd1-201ENSMUST00000137780 1331 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
Nkx1-1G3UXB3 Oprm1-202ENSMUST00000052751 1334 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Nkx1-1G3UXB3 Oprm1-207ENSMUST00000092731 1332 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Nkx1-1G3UXB3 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Nkx1-1G3UXB3 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Nkx1-1G3UXB3 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Nkx1-1G3UXB3 Fst-202ENSMUST00000223640 2612 ntBASIC17.74■□□□□ 0.43
Nkx1-1G3UXB3 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Nkx1-1G3UXB3 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
Nkx1-1G3UXB3 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Nkx1-1G3UXB3 Cdadc1-201ENSMUST00000022555 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Nkx1-1G3UXB3 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
Nkx1-1G3UXB3 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC17.74■□□□□ 0.43
Nkx1-1G3UXB3 Defb30-203ENSMUST00000111208 503 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Nkx1-1G3UXB3 Defb30-204ENSMUST00000111209 721 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Nkx1-1G3UXB3 Gm6539-201ENSMUST00000119157 1064 ntBASIC17.74■□□□□ 0.43
Nkx1-1G3UXB3 Gm12395-201ENSMUST00000144765 536 ntTSL 5 BASIC17.74■□□□□ 0.43
Nkx1-1G3UXB3 Olfr455-201ENSMUST00000171307 954 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
Nkx1-1G3UXB3 Gm44756-201ENSMUST00000206172 1069 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Nkx1-1G3UXB3 Olfr1468-ps1-201ENSMUST00000207287 1208 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
Nkx1-1G3UXB3 Gm18597-201ENSMUST00000209519 694 ntBASIC17.74■□□□□ 0.43
Nkx1-1G3UXB3 Manf-201ENSMUST00000069036 960 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Nkx1-1G3UXB3 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Nkx1-1G3UXB3 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
Nkx1-1G3UXB3 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Nkx1-1G3UXB3 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
Nkx1-1G3UXB3 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Nkx1-1G3UXB3 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Nkx1-1G3UXB3 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Nkx1-1G3UXB3 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC17.74■□□□□ 0.43
Nkx1-1G3UXB3 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Nkx1-1G3UXB3 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Nkx1-1G3UXB3 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Nkx1-1G3UXB3 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Nkx1-1G3UXB3 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Nkx1-1G3UXB3 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC17.73■□□□□ 0.43
Nkx1-1G3UXB3 Casp8ap2-202ENSMUST00000108178 1189 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
Nkx1-1G3UXB3 Gm15321-201ENSMUST00000121290 288 ntBASIC17.73■□□□□ 0.43
Nkx1-1G3UXB3 4933427G23Rik-202ENSMUST00000126393 544 ntBASIC17.73■□□□□ 0.43
Nkx1-1G3UXB3 2310061I04Rik-204ENSMUST00000148721 1293 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
Nkx1-1G3UXB3 Ppm1h-208ENSMUST00000162969 811 ntTSL 3 BASIC17.73■□□□□ 0.43
Nkx1-1G3UXB3 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Nkx1-1G3UXB3 1700031M16Rik-205ENSMUST00000189907 969 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 60.4 ms