Protein–RNA interactions for Protein: E9PVD3

Dchs1, Protocadherin-16, mousemouse

Predictions only

Length 3,291 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Dchs1E9PVD3 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Dchs1E9PVD3 Metrnl-202ENSMUST00000106089 1101 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
Dchs1E9PVD3 Gm16198-201ENSMUST00000118766 670 ntBASIC13.56□□□□□ -0.24
Dchs1E9PVD3 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC13.56□□□□□ -0.24
Dchs1E9PVD3 Rpsa-ps10-201ENSMUST00000057740 885 ntBASIC13.56□□□□□ -0.24
Dchs1E9PVD3 Ap2s1-201ENSMUST00000086112 836 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Dchs1E9PVD3 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Dchs1E9PVD3 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Dchs1E9PVD3 Gm26681-201ENSMUST00000180851 1440 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Dchs1E9PVD3 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Dchs1E9PVD3 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
Dchs1E9PVD3 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Dchs1E9PVD3 Crybb3-205ENSMUST00000120506 804 ntAPPRIS P1 TSL 3 BASIC13.55□□□□□ -0.24
Dchs1E9PVD3 Gm18062-201ENSMUST00000208020 547 ntBASIC13.55□□□□□ -0.24
Dchs1E9PVD3 Gm18055-201ENSMUST00000208254 547 ntBASIC13.55□□□□□ -0.24
Dchs1E9PVD3 AC158538.2-201ENSMUST00000225455 906 ntBASIC13.55□□□□□ -0.24
Dchs1E9PVD3 CT025555.1-201ENSMUST00000225901 1217 ntBASIC13.55□□□□□ -0.24
Dchs1E9PVD3 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Dchs1E9PVD3 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Dchs1E9PVD3 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Dchs1E9PVD3 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Dchs1E9PVD3 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Dchs1E9PVD3 Blzf1-202ENSMUST00000086032 1602 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Dchs1E9PVD3 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Dchs1E9PVD3 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Dchs1E9PVD3 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Dchs1E9PVD3 Tmem128-202ENSMUST00000119047 726 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Dchs1E9PVD3 D11Bhm181e-201ENSMUST00000122252 282 ntBASIC13.55□□□□□ -0.24
Dchs1E9PVD3 Gm12017-201ENSMUST00000122453 1003 ntBASIC13.55□□□□□ -0.24
Dchs1E9PVD3 Gm9063-201ENSMUST00000223299 582 ntBASIC13.55□□□□□ -0.24
Dchs1E9PVD3 Prg3-201ENSMUST00000028466 949 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Dchs1E9PVD3 Gm6180-201ENSMUST00000065243 498 ntBASIC13.55□□□□□ -0.24
Dchs1E9PVD3 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Dchs1E9PVD3 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Dchs1E9PVD3 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Dchs1E9PVD3 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC13.55□□□□□ -0.24
Dchs1E9PVD3 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Dchs1E9PVD3 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC13.55□□□□□ -0.24
Dchs1E9PVD3 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC13.55□□□□□ -0.24
Dchs1E9PVD3 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Dchs1E9PVD3 Gm16137-201ENSMUST00000161571 664 ntTSL 5 BASIC13.54□□□□□ -0.24
Dchs1E9PVD3 AC151828.1-201ENSMUST00000219552 661 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Dchs1E9PVD3 Phgr1-201ENSMUST00000061360 538 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
Dchs1E9PVD3 Gm3002-201ENSMUST00000170480 1955 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
Dchs1E9PVD3 Gm3005-202ENSMUST00000178728 1955 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
Dchs1E9PVD3 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Dchs1E9PVD3 Atat1-203ENSMUST00000077494 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Dchs1E9PVD3 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Dchs1E9PVD3 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Dchs1E9PVD3 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Dchs1E9PVD3 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Dchs1E9PVD3 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Dchs1E9PVD3 1700121C08Rik-201ENSMUST00000137546 677 ntTSL 3 BASIC13.54□□□□□ -0.24
Dchs1E9PVD3 Mir1938-201ENSMUST00000158746 100 ntBASIC13.54□□□□□ -0.24
Dchs1E9PVD3 5830408C22Rik-201ENSMUST00000210072 1115 ntTSL 5 BASIC13.54□□□□□ -0.24
Dchs1E9PVD3 Mlf1-202ENSMUST00000077916 1114 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Dchs1E9PVD3 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Dchs1E9PVD3 Syt8-201ENSMUST00000097939 1300 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Dchs1E9PVD3 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Dchs1E9PVD3 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Dchs1E9PVD3 Ppp2r5b-201ENSMUST00000025695 2742 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Dchs1E9PVD3 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
Dchs1E9PVD3 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Dchs1E9PVD3 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC13.54□□□□□ -0.24
Dchs1E9PVD3 Il31-203ENSMUST00000198901 984 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Dchs1E9PVD3 Hsd17b14-205ENSMUST00000210300 797 ntTSL 5 BASIC13.54□□□□□ -0.24
Dchs1E9PVD3 Gm36756-203ENSMUST00000223029 1166 ntTSL 5 BASIC13.54□□□□□ -0.24
Dchs1E9PVD3 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Dchs1E9PVD3 Tst-201ENSMUST00000058659 1096 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Dchs1E9PVD3 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Dchs1E9PVD3 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Dchs1E9PVD3 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Dchs1E9PVD3 AC130669.1-201ENSMUST00000228537 1672 ntBASIC13.53□□□□□ -0.24
Dchs1E9PVD3 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Dchs1E9PVD3 Klrg1-201ENSMUST00000032207 1414 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Dchs1E9PVD3 Tpd52-206ENSMUST00000121038 849 ntTSL 5 BASIC13.53□□□□□ -0.24
Dchs1E9PVD3 Gm27680-201ENSMUST00000184192 160 ntBASIC13.53□□□□□ -0.24
Dchs1E9PVD3 B9d2-202ENSMUST00000205325 593 ntTSL 2 BASIC13.53□□□□□ -0.24
Dchs1E9PVD3 AC131710.1-201ENSMUST00000228336 990 ntBASIC13.53□□□□□ -0.24
Dchs1E9PVD3 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Dchs1E9PVD3 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Dchs1E9PVD3 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
Dchs1E9PVD3 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Dchs1E9PVD3 Cldn14-204ENSMUST00000169391 1456 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
Dchs1E9PVD3 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Dchs1E9PVD3 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC13.53□□□□□ -0.24
Dchs1E9PVD3 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Dchs1E9PVD3 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Dchs1E9PVD3 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Dchs1E9PVD3 Mbd3-202ENSMUST00000105347 914 ntTSL 2 BASIC13.52□□□□□ -0.24
Dchs1E9PVD3 Rgs20-203ENSMUST00000119256 883 ntAPPRIS ALT2 TSL 3 BASIC13.52□□□□□ -0.24
Dchs1E9PVD3 Trip6-203ENSMUST00000199121 366 ntTSL 3 BASIC13.52□□□□□ -0.24
Dchs1E9PVD3 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Dchs1E9PVD3 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.24
Dchs1E9PVD3 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Dchs1E9PVD3 Iffo1-201ENSMUST00000117675 2833 ntAPPRIS P4 TSL 1 (best) BASIC13.52□□□□□ -0.24
Dchs1E9PVD3 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Dchs1E9PVD3 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.24
Dchs1E9PVD3 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Dchs1E9PVD3 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 43.6 ms