Protein–RNA interactions for Protein: D3Z3K2

Ccnb1ip1, E3 ubiquitin-protein ligase CCNB1IP1, mousemouse

Predictions only

Length 276 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccnb1ip1D3Z3K2 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Ccnb1ip1D3Z3K2 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Ccnb1ip1D3Z3K2 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Ccnb1ip1D3Z3K2 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC14.02□□□□□ -0.16
Ccnb1ip1D3Z3K2 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Ccnb1ip1D3Z3K2 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ccnb1ip1D3Z3K2 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC14.02□□□□□ -0.17
Ccnb1ip1D3Z3K2 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC14.02□□□□□ -0.17
Ccnb1ip1D3Z3K2 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Ccnb1ip1D3Z3K2 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Ccnb1ip1D3Z3K2 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ccnb1ip1D3Z3K2 AV356131-201ENSMUST00000206201 750 ntBASIC14.02□□□□□ -0.17
Ccnb1ip1D3Z3K2 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ccnb1ip1D3Z3K2 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ccnb1ip1D3Z3K2 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
Ccnb1ip1D3Z3K2 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ccnb1ip1D3Z3K2 Cpne1-203ENSMUST00000109608 3492 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ccnb1ip1D3Z3K2 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ccnb1ip1D3Z3K2 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ccnb1ip1D3Z3K2 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ccnb1ip1D3Z3K2 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Ccnb1ip1D3Z3K2 Il1rn-204ENSMUST00000114487 2474 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Ccnb1ip1D3Z3K2 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
Ccnb1ip1D3Z3K2 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ccnb1ip1D3Z3K2 Cep164-204ENSMUST00000213154 6105 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
Ccnb1ip1D3Z3K2 Spon2-201ENSMUST00000046186 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ccnb1ip1D3Z3K2 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC14.01□□□□□ -0.17
Ccnb1ip1D3Z3K2 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC14.01□□□□□ -0.17
Ccnb1ip1D3Z3K2 Rspry1-207ENSMUST00000212729 2800 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Ccnb1ip1D3Z3K2 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ccnb1ip1D3Z3K2 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ccnb1ip1D3Z3K2 Gm5049-201ENSMUST00000195878 1590 ntBASIC14.01□□□□□ -0.17
Ccnb1ip1D3Z3K2 Sesn1-201ENSMUST00000041438 2600 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ccnb1ip1D3Z3K2 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC14.01□□□□□ -0.17
Ccnb1ip1D3Z3K2 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Ccnb1ip1D3Z3K2 Rbbp8nl-201ENSMUST00000038529 2319 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ccnb1ip1D3Z3K2 Nphp4-202ENSMUST00000081393 5027 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ccnb1ip1D3Z3K2 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC14.01□□□□□ -0.17
Ccnb1ip1D3Z3K2 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ccnb1ip1D3Z3K2 Rgs6-208ENSMUST00000186458 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ccnb1ip1D3Z3K2 Gm13148-201ENSMUST00000118892 745 ntBASIC14.01□□□□□ -0.17
Ccnb1ip1D3Z3K2 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC14.01□□□□□ -0.17
Ccnb1ip1D3Z3K2 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Ccnb1ip1D3Z3K2 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC14.01□□□□□ -0.17
Ccnb1ip1D3Z3K2 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Ccnb1ip1D3Z3K2 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ccnb1ip1D3Z3K2 Ilf2-201ENSMUST00000001042 2027 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ccnb1ip1D3Z3K2 Rnf103-203ENSMUST00000114179 2671 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Ccnb1ip1D3Z3K2 Elovl6-205ENSMUST00000199910 2610 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ccnb1ip1D3Z3K2 Foxj3-201ENSMUST00000044564 4789 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ccnb1ip1D3Z3K2 Pcdha6-202ENSMUST00000193777 5367 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ccnb1ip1D3Z3K2 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ccnb1ip1D3Z3K2 Gm29683-203ENSMUST00000209071 2488 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Ccnb1ip1D3Z3K2 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Ccnb1ip1D3Z3K2 AU040320-201ENSMUST00000047431 4384 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ccnb1ip1D3Z3K2 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Ccnb1ip1D3Z3K2 Kdm2b-201ENSMUST00000031435 3532 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Ccnb1ip1D3Z3K2 Pnn-201ENSMUST00000021381 3485 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ccnb1ip1D3Z3K2 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ccnb1ip1D3Z3K2 Med15-201ENSMUST00000012259 3383 ntAPPRIS P4 TSL 1 (best) BASIC14□□□□□ -0.17
Ccnb1ip1D3Z3K2 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ccnb1ip1D3Z3K2 Plch2-201ENSMUST00000105631 5053 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Ccnb1ip1D3Z3K2 Pcdhga12-201ENSMUST00000044851 5080 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ccnb1ip1D3Z3K2 Ptprk-201ENSMUST00000166468 6177 ntAPPRIS P2 TSL 2 BASIC14□□□□□ -0.17
Ccnb1ip1D3Z3K2 Prkcz-201ENSMUST00000030922 2641 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ccnb1ip1D3Z3K2 Bcan-201ENSMUST00000090971 3141 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ccnb1ip1D3Z3K2 Gm20546-201ENSMUST00000173141 1889 ntTSL 1 (best) BASIC14□□□□□ -0.17
Ccnb1ip1D3Z3K2 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC14□□□□□ -0.17
Ccnb1ip1D3Z3K2 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC14□□□□□ -0.17
Ccnb1ip1D3Z3K2 Gm11249-201ENSMUST00000117071 859 ntBASIC14□□□□□ -0.17
Ccnb1ip1D3Z3K2 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC14□□□□□ -0.17
Ccnb1ip1D3Z3K2 Gm18421-201ENSMUST00000204122 625 ntBASIC14□□□□□ -0.17
Ccnb1ip1D3Z3K2 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Ccnb1ip1D3Z3K2 Gm44672-201ENSMUST00000206944 1098 ntBASIC14□□□□□ -0.17
Ccnb1ip1D3Z3K2 Pgd-201ENSMUST00000084124 2218 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ccnb1ip1D3Z3K2 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC14□□□□□ -0.17
Ccnb1ip1D3Z3K2 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ccnb1ip1D3Z3K2 Syt12-201ENSMUST00000059295 3581 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ccnb1ip1D3Z3K2 Tnn-201ENSMUST00000039178 5817 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ccnb1ip1D3Z3K2 Zfyve27-207ENSMUST00000169536 5611 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Ccnb1ip1D3Z3K2 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC14□□□□□ -0.17
Ccnb1ip1D3Z3K2 Pam-201ENSMUST00000058762 4095 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Ccnb1ip1D3Z3K2 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Ccnb1ip1D3Z3K2 Tmem184c-201ENSMUST00000034030 2678 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ccnb1ip1D3Z3K2 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ccnb1ip1D3Z3K2 Ubc-202ENSMUST00000136312 2618 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ccnb1ip1D3Z3K2 Pbx3-201ENSMUST00000040638 2587 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ccnb1ip1D3Z3K2 Myef2-206ENSMUST00000142718 2942 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
Ccnb1ip1D3Z3K2 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ccnb1ip1D3Z3K2 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Ccnb1ip1D3Z3K2 Lats2-210ENSMUST00000174694 3287 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
Ccnb1ip1D3Z3K2 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Ccnb1ip1D3Z3K2 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ccnb1ip1D3Z3K2 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ccnb1ip1D3Z3K2 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ccnb1ip1D3Z3K2 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ccnb1ip1D3Z3K2 Stt3b-201ENSMUST00000035010 4221 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ccnb1ip1D3Z3K2 Tbl1xr1-203ENSMUST00000193734 8237 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ccnb1ip1D3Z3K2 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC13.99□□□□□ -0.17
Ccnb1ip1D3Z3K2 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC13.99□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 33.6 ms