Protein–RNA interactions for Protein: B5KM66

Syce3, Synaptonemal complex central element protein 3, mousemouse

Predictions only

Length 88 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syce3B5KM66 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Syce3B5KM66 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
Syce3B5KM66 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Syce3B5KM66 Hps1-204ENSMUST00000160455 2952 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Syce3B5KM66 Caprin2-201ENSMUST00000072324 2952 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
Syce3B5KM66 Efr3b-201ENSMUST00000111178 6547 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Syce3B5KM66 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
Syce3B5KM66 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Syce3B5KM66 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Syce3B5KM66 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Syce3B5KM66 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC17.72■□□□□ 0.43
Syce3B5KM66 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Syce3B5KM66 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Syce3B5KM66 B3gnt7-201ENSMUST00000113306 2582 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Syce3B5KM66 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Syce3B5KM66 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Syce3B5KM66 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Syce3B5KM66 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Syce3B5KM66 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC17.72■□□□□ 0.43
Syce3B5KM66 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC17.72■□□□□ 0.43
Syce3B5KM66 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Syce3B5KM66 Aqp11-205ENSMUST00000206389 3737 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Syce3B5KM66 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Syce3B5KM66 Dgkq-201ENSMUST00000053913 4938 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Syce3B5KM66 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Syce3B5KM66 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Syce3B5KM66 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Syce3B5KM66 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Syce3B5KM66 Lamc1-201ENSMUST00000027752 7622 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Syce3B5KM66 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Syce3B5KM66 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Syce3B5KM66 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
Syce3B5KM66 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Syce3B5KM66 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Syce3B5KM66 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Syce3B5KM66 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Syce3B5KM66 Klf15-202ENSMUST00000113530 2374 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
Syce3B5KM66 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Syce3B5KM66 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC17.71■□□□□ 0.43
Syce3B5KM66 Gm12134-201ENSMUST00000122109 520 ntBASIC17.71■□□□□ 0.43
Syce3B5KM66 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Syce3B5KM66 Mir6404-201ENSMUST00000183699 94 ntBASIC17.71■□□□□ 0.43
Syce3B5KM66 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC17.71■□□□□ 0.43
Syce3B5KM66 CT009713.7-201ENSMUST00000224689 571 ntBASIC17.71■□□□□ 0.43
Syce3B5KM66 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC17.71■□□□□ 0.43
Syce3B5KM66 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Syce3B5KM66 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
Syce3B5KM66 Wbscr25-202ENSMUST00000148729 2075 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Syce3B5KM66 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Syce3B5KM66 Tns1-222ENSMUST00000212888 5643 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
Syce3B5KM66 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Syce3B5KM66 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC17.71■□□□□ 0.43
Syce3B5KM66 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Syce3B5KM66 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC17.71■□□□□ 0.42
Syce3B5KM66 Kif3a-201ENSMUST00000057330 2290 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Syce3B5KM66 Gm44291-201ENSMUST00000203102 2865 ntBASIC17.7■□□□□ 0.42
Syce3B5KM66 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC17.7■□□□□ 0.42
Syce3B5KM66 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Syce3B5KM66 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Syce3B5KM66 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC17.7■□□□□ 0.42
Syce3B5KM66 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Syce3B5KM66 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Syce3B5KM66 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
Syce3B5KM66 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC17.7■□□□□ 0.42
Syce3B5KM66 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Syce3B5KM66 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC17.7■□□□□ 0.42
Syce3B5KM66 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Syce3B5KM66 Tmem30b-201ENSMUST00000042975 2991 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
Syce3B5KM66 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Syce3B5KM66 Rusc1-202ENSMUST00000090929 3706 ntAPPRIS P4 TSL 1 (best) BASIC17.7■□□□□ 0.42
Syce3B5KM66 Cep85l-205ENSMUST00000220443 7425 ntAPPRIS P2 TSL 5 BASIC17.7■□□□□ 0.42
Syce3B5KM66 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
Syce3B5KM66 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Syce3B5KM66 Gxylt2-201ENSMUST00000032157 7658 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Syce3B5KM66 Sema6b-202ENSMUST00000167545 3847 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Syce3B5KM66 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Syce3B5KM66 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
Syce3B5KM66 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Syce3B5KM66 Ptprs-211ENSMUST00000223859 5588 ntBASIC17.69■□□□□ 0.42
Syce3B5KM66 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Syce3B5KM66 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Syce3B5KM66 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
Syce3B5KM66 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC17.69■□□□□ 0.42
Syce3B5KM66 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Syce3B5KM66 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC17.69■□□□□ 0.42
Syce3B5KM66 Tmem201-201ENSMUST00000054459 4631 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
Syce3B5KM66 Tspan15-201ENSMUST00000047883 3638 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Syce3B5KM66 Pbx3-201ENSMUST00000040638 2587 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
Syce3B5KM66 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Syce3B5KM66 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Syce3B5KM66 Gm10052-201ENSMUST00000168019 960 ntBASIC17.69■□□□□ 0.42
Syce3B5KM66 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC17.69■□□□□ 0.42
Syce3B5KM66 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC17.69■□□□□ 0.42
Syce3B5KM66 Gm44430-201ENSMUST00000203376 995 ntBASIC17.69■□□□□ 0.42
Syce3B5KM66 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Syce3B5KM66 Gm7729-201ENSMUST00000050143 801 ntBASIC17.69■□□□□ 0.42
Syce3B5KM66 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Syce3B5KM66 Fbxl19-207ENSMUST00000206893 3449 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
Syce3B5KM66 Slc22a15-207ENSMUST00000190824 3010 ntTSL 5 BASIC17.69■□□□□ 0.42
Syce3B5KM66 Cbarp-215ENSMUST00000170219 2941 ntAPPRIS P2 TSL 5 BASIC17.69■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 20.4 ms