Protein–RNA interactions for Protein: A0A0G2JG37

Trav9d-4, T cell receptor alpha variable 9D-4 (Fragment), mousemouse

Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9d-4A0A0G2JG37 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Trav9d-4A0A0G2JG37 Emc7-201ENSMUST00000069747 5826 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Trav9d-4A0A0G2JG37 Sgsm1-201ENSMUST00000048112 5161 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Trav9d-4A0A0G2JG37 Aff2-201ENSMUST00000033532 4523 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Trav9d-4A0A0G2JG37 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Trav9d-4A0A0G2JG37 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Trav9d-4A0A0G2JG37 Gbp5-201ENSMUST00000090127 3055 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Trav9d-4A0A0G2JG37 Col22a1-202ENSMUST00000159993 8809 ntAPPRIS P1 TSL 5 BASIC10.61□□□□□ -0.71
Trav9d-4A0A0G2JG37 Naa30-201ENSMUST00000037362 4464 ntAPPRIS ALT2 TSL 5 BASIC10.61□□□□□ -0.71
Trav9d-4A0A0G2JG37 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Trav9d-4A0A0G2JG37 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Trav9d-4A0A0G2JG37 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Trav9d-4A0A0G2JG37 Gm12669-201ENSMUST00000122162 1009 ntBASIC10.61□□□□□ -0.71
Trav9d-4A0A0G2JG37 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC10.61□□□□□ -0.71
Trav9d-4A0A0G2JG37 Gm10653-202ENSMUST00000139570 835 ntBASIC10.61□□□□□ -0.71
Trav9d-4A0A0G2JG37 Gm16042-201ENSMUST00000204813 1247 ntBASIC10.61□□□□□ -0.71
Trav9d-4A0A0G2JG37 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC10.61□□□□□ -0.71
Trav9d-4A0A0G2JG37 Odf3b-204ENSMUST00000227834 930 ntBASIC10.61□□□□□ -0.71
Trav9d-4A0A0G2JG37 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Trav9d-4A0A0G2JG37 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Trav9d-4A0A0G2JG37 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Trav9d-4A0A0G2JG37 Sall3-201ENSMUST00000057950 6886 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Trav9d-4A0A0G2JG37 Zbtb7b-204ENSMUST00000107435 4333 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Trav9d-4A0A0G2JG37 Arhgap28-201ENSMUST00000024840 5322 ntAPPRIS P2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Trav9d-4A0A0G2JG37 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC10.61□□□□□ -0.71
Trav9d-4A0A0G2JG37 Ptpn11-202ENSMUST00000100770 5599 ntAPPRIS ALT1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Trav9d-4A0A0G2JG37 Las1l-201ENSMUST00000079987 2530 ntAPPRIS P2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Trav9d-4A0A0G2JG37 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Trav9d-4A0A0G2JG37 Fhad1-202ENSMUST00000105779 4263 ntAPPRIS P1 TSL 5 BASIC10.61□□□□□ -0.71
Trav9d-4A0A0G2JG37 Cacna1g-202ENSMUST00000100561 8125 ntAPPRIS P3 TSL 1 (best) BASIC10.61□□□□□ -0.71
Trav9d-4A0A0G2JG37 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Trav9d-4A0A0G2JG37 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Trav9d-4A0A0G2JG37 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Trav9d-4A0A0G2JG37 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Trav9d-4A0A0G2JG37 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Trav9d-4A0A0G2JG37 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Trav9d-4A0A0G2JG37 Btd-201ENSMUST00000090147 2324 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Trav9d-4A0A0G2JG37 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Trav9d-4A0A0G2JG37 Col18a1-201ENSMUST00000072755 5595 ntAPPRIS ALT2 TSL 5 BASIC10.6□□□□□ -0.71
Trav9d-4A0A0G2JG37 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Trav9d-4A0A0G2JG37 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Trav9d-4A0A0G2JG37 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Trav9d-4A0A0G2JG37 Max-202ENSMUST00000110395 1942 ntAPPRIS P3 TSL 1 (best) BASIC10.6□□□□□ -0.71
Trav9d-4A0A0G2JG37 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Trav9d-4A0A0G2JG37 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC10.6□□□□□ -0.71
Trav9d-4A0A0G2JG37 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Trav9d-4A0A0G2JG37 Ssh1-204ENSMUST00000159592 8436 ntAPPRIS P2 TSL 1 (best) BASIC10.6□□□□□ -0.71
Trav9d-4A0A0G2JG37 Gm10605-202ENSMUST00000183019 3198 ntBASIC10.6□□□□□ -0.71
Trav9d-4A0A0G2JG37 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Trav9d-4A0A0G2JG37 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC10.6□□□□□ -0.71
Trav9d-4A0A0G2JG37 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Trav9d-4A0A0G2JG37 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC10.6□□□□□ -0.71
Trav9d-4A0A0G2JG37 Kif7-204ENSMUST00000184137 4093 ntAPPRIS P3 TSL 5 BASIC10.6□□□□□ -0.71
Trav9d-4A0A0G2JG37 Josd1-201ENSMUST00000023061 3394 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Trav9d-4A0A0G2JG37 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC10.6□□□□□ -0.71
Trav9d-4A0A0G2JG37 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC10.6□□□□□ -0.71
Trav9d-4A0A0G2JG37 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC10.6□□□□□ -0.71
Trav9d-4A0A0G2JG37 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC10.6□□□□□ -0.71
Trav9d-4A0A0G2JG37 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Trav9d-4A0A0G2JG37 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Trav9d-4A0A0G2JG37 Gm44450-201ENSMUST00000199528 114 ntBASIC10.6□□□□□ -0.71
Trav9d-4A0A0G2JG37 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Trav9d-4A0A0G2JG37 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Trav9d-4A0A0G2JG37 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Trav9d-4A0A0G2JG37 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Trav9d-4A0A0G2JG37 Papd5-203ENSMUST00000119033 4624 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Trav9d-4A0A0G2JG37 Gm9768-201ENSMUST00000206007 2861 ntBASIC10.6□□□□□ -0.71
Trav9d-4A0A0G2JG37 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Trav9d-4A0A0G2JG37 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Trav9d-4A0A0G2JG37 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC10.6□□□□□ -0.71
Trav9d-4A0A0G2JG37 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC10.6□□□□□ -0.71
Trav9d-4A0A0G2JG37 Taf3-201ENSMUST00000026888 4792 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Trav9d-4A0A0G2JG37 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Trav9d-4A0A0G2JG37 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Trav9d-4A0A0G2JG37 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC10.6□□□□□ -0.71
Trav9d-4A0A0G2JG37 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Trav9d-4A0A0G2JG37 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Trav9d-4A0A0G2JG37 Tmem110-201ENSMUST00000006701 3742 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Trav9d-4A0A0G2JG37 Rcbtb1-202ENSMUST00000043227 3903 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Trav9d-4A0A0G2JG37 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Trav9d-4A0A0G2JG37 Nbeal2-206ENSMUST00000133191 8782 ntAPPRIS ALT2 TSL 5 BASIC10.6□□□□□ -0.71
Trav9d-4A0A0G2JG37 Madd-201ENSMUST00000066420 3753 ntAPPRIS ALT2 TSL 5 BASIC10.6□□□□□ -0.71
Trav9d-4A0A0G2JG37 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC10.6□□□□□ -0.71
Trav9d-4A0A0G2JG37 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Trav9d-4A0A0G2JG37 Gigyf2-201ENSMUST00000027475 5724 ntAPPRIS P3 TSL 1 (best) BASIC10.59□□□□□ -0.71
Trav9d-4A0A0G2JG37 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC10.59□□□□□ -0.71
Trav9d-4A0A0G2JG37 Hlcs-202ENSMUST00000163193 5371 ntAPPRIS P2 TSL 1 (best) BASIC10.59□□□□□ -0.71
Trav9d-4A0A0G2JG37 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC10.59□□□□□ -0.71
Trav9d-4A0A0G2JG37 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Trav9d-4A0A0G2JG37 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Trav9d-4A0A0G2JG37 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC10.59□□□□□ -0.71
Trav9d-4A0A0G2JG37 Thap2-202ENSMUST00000218842 4970 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Trav9d-4A0A0G2JG37 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Trav9d-4A0A0G2JG37 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Trav9d-4A0A0G2JG37 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC10.59□□□□□ -0.71
Trav9d-4A0A0G2JG37 Caprin1-201ENSMUST00000028607 6169 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Trav9d-4A0A0G2JG37 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Trav9d-4A0A0G2JG37 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Trav9d-4A0A0G2JG37 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC10.59□□□□□ -0.71
Trav9d-4A0A0G2JG37 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC10.59□□□□□ -0.71
Retrieved 100 of 76,532 protein–RNA pairs in 24.1 ms