Protein–RNA interactions for Protein: A0A075B617

Trav16d-dv11, T cell receptor alpha variable 16D-DV11 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav16d-dv11A0A075B617 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Trav16d-dv11A0A075B617 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav16d-dv11A0A075B617 Pars2-201ENSMUST00000058905 2191 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav16d-dv11A0A075B617 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC11.4□□□□□ -0.58
Trav16d-dv11A0A075B617 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav16d-dv11A0A075B617 Pcdhga8-201ENSMUST00000066149 4730 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav16d-dv11A0A075B617 Rspry1-207ENSMUST00000212729 2800 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Trav16d-dv11A0A075B617 Sorbs3-204ENSMUST00000227929 2460 ntBASIC11.4□□□□□ -0.58
Trav16d-dv11A0A075B617 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC11.4□□□□□ -0.58
Trav16d-dv11A0A075B617 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Trav16d-dv11A0A075B617 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav16d-dv11A0A075B617 Gm18421-201ENSMUST00000204122 625 ntBASIC11.4□□□□□ -0.58
Trav16d-dv11A0A075B617 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav16d-dv11A0A075B617 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC11.4□□□□□ -0.58
Trav16d-dv11A0A075B617 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav16d-dv11A0A075B617 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav16d-dv11A0A075B617 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav16d-dv11A0A075B617 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav16d-dv11A0A075B617 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav16d-dv11A0A075B617 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Trav16d-dv11A0A075B617 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC11.4□□□□□ -0.58
Trav16d-dv11A0A075B617 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav16d-dv11A0A075B617 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav16d-dv11A0A075B617 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.58
Trav16d-dv11A0A075B617 Zfp628-201ENSMUST00000116354 3523 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav16d-dv11A0A075B617 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.59
Trav16d-dv11A0A075B617 Eif4g3-215ENSMUST00000203828 5289 ntTSL 5 BASIC11.4□□□□□ -0.59
Trav16d-dv11A0A075B617 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Trav16d-dv11A0A075B617 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.59
Trav16d-dv11A0A075B617 Galnt2-201ENSMUST00000034458 4113 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Trav16d-dv11A0A075B617 Gm7712-202ENSMUST00000222331 1510 ntBASIC11.4□□□□□ -0.59
Trav16d-dv11A0A075B617 Fbxo3-201ENSMUST00000028603 4740 ntAPPRIS P4 TSL 1 (best) BASIC11.4□□□□□ -0.59
Trav16d-dv11A0A075B617 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC11.4□□□□□ -0.59
Trav16d-dv11A0A075B617 Olfr317-203ENSMUST00000216196 2781 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
Trav16d-dv11A0A075B617 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav16d-dv11A0A075B617 Timp4-201ENSMUST00000032462 5496 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav16d-dv11A0A075B617 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav16d-dv11A0A075B617 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
Trav16d-dv11A0A075B617 Lats2-210ENSMUST00000174694 3287 ntAPPRIS P1 TSL 2 BASIC11.39□□□□□ -0.59
Trav16d-dv11A0A075B617 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Trav16d-dv11A0A075B617 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC11.39□□□□□ -0.59
Trav16d-dv11A0A075B617 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Trav16d-dv11A0A075B617 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Trav16d-dv11A0A075B617 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC11.39□□□□□ -0.59
Trav16d-dv11A0A075B617 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav16d-dv11A0A075B617 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC11.39□□□□□ -0.59
Trav16d-dv11A0A075B617 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav16d-dv11A0A075B617 Gemin5-205ENSMUST00000172035 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav16d-dv11A0A075B617 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
Trav16d-dv11A0A075B617 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav16d-dv11A0A075B617 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav16d-dv11A0A075B617 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Trav16d-dv11A0A075B617 Ikzf5-202ENSMUST00000121033 2231 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Trav16d-dv11A0A075B617 Gins2-201ENSMUST00000034278 3900 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav16d-dv11A0A075B617 Gm5357-201ENSMUST00000212720 1924 ntBASIC11.39□□□□□ -0.59
Trav16d-dv11A0A075B617 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav16d-dv11A0A075B617 Mrps35-201ENSMUST00000036111 4162 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav16d-dv11A0A075B617 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav16d-dv11A0A075B617 Flt4-201ENSMUST00000020617 6255 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav16d-dv11A0A075B617 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav16d-dv11A0A075B617 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav16d-dv11A0A075B617 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC11.38□□□□□ -0.59
Trav16d-dv11A0A075B617 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC11.38□□□□□ -0.59
Trav16d-dv11A0A075B617 St8sia3-201ENSMUST00000025477 6282 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav16d-dv11A0A075B617 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
Trav16d-dv11A0A075B617 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC11.38□□□□□ -0.59
Trav16d-dv11A0A075B617 Xpot-201ENSMUST00000039810 5992 ntTSL 5 BASIC11.38□□□□□ -0.59
Trav16d-dv11A0A075B617 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav16d-dv11A0A075B617 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav16d-dv11A0A075B617 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav16d-dv11A0A075B617 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC11.38□□□□□ -0.59
Trav16d-dv11A0A075B617 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav16d-dv11A0A075B617 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC11.38□□□□□ -0.59
Trav16d-dv11A0A075B617 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC11.38□□□□□ -0.59
Trav16d-dv11A0A075B617 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Trav16d-dv11A0A075B617 Pou2f2-209ENSMUST00000175774 7047 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav16d-dv11A0A075B617 Knop1-204ENSMUST00000106550 5524 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav16d-dv11A0A075B617 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
Trav16d-dv11A0A075B617 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav16d-dv11A0A075B617 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav16d-dv11A0A075B617 Myo1c-201ENSMUST00000069057 4547 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Trav16d-dv11A0A075B617 Lmx1b-201ENSMUST00000041730 4790 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav16d-dv11A0A075B617 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav16d-dv11A0A075B617 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC11.38□□□□□ -0.59
Trav16d-dv11A0A075B617 Ankrd13b-202ENSMUST00000092892 3336 ntAPPRIS P2 TSL 5 BASIC11.38□□□□□ -0.59
Trav16d-dv11A0A075B617 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav16d-dv11A0A075B617 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC11.38□□□□□ -0.59
Trav16d-dv11A0A075B617 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC11.38□□□□□ -0.59
Trav16d-dv11A0A075B617 Siglecf-203ENSMUST00000122423 2607 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav16d-dv11A0A075B617 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav16d-dv11A0A075B617 Ap5m1-205ENSMUST00000227431 3757 ntBASIC11.38□□□□□ -0.59
Trav16d-dv11A0A075B617 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Trav16d-dv11A0A075B617 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Trav16d-dv11A0A075B617 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC11.37□□□□□ -0.59
Trav16d-dv11A0A075B617 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trav16d-dv11A0A075B617 Sned1-201ENSMUST00000062202 9147 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trav16d-dv11A0A075B617 Mbp-203ENSMUST00000075372 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trav16d-dv11A0A075B617 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Trav16d-dv11A0A075B617 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trav16d-dv11A0A075B617 Cadps2-213ENSMUST00000166458 4598 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 41.4 ms