Protein–RNA interactions for Protein: A0A075B5Z8

Trav6-1, T cell receptor alpha variable 6-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-1A0A075B5Z8 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav6-1A0A075B5Z8 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav6-1A0A075B5Z8 Ocrl-201ENSMUST00000001202 5253 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav6-1A0A075B5Z8 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav6-1A0A075B5Z8 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav6-1A0A075B5Z8 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav6-1A0A075B5Z8 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Trav6-1A0A075B5Z8 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Trav6-1A0A075B5Z8 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav6-1A0A075B5Z8 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Trav6-1A0A075B5Z8 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav6-1A0A075B5Z8 Camk2g-217ENSMUST00000226630 1937 ntBASIC12.43□□□□□ -0.42
Trav6-1A0A075B5Z8 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav6-1A0A075B5Z8 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav6-1A0A075B5Z8 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav6-1A0A075B5Z8 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav6-1A0A075B5Z8 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav6-1A0A075B5Z8 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav6-1A0A075B5Z8 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav6-1A0A075B5Z8 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav6-1A0A075B5Z8 Efs-202ENSMUST00000227037 2540 ntBASIC12.42□□□□□ -0.42
Trav6-1A0A075B5Z8 Magi1-202ENSMUST00000089317 7209 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav6-1A0A075B5Z8 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav6-1A0A075B5Z8 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav6-1A0A075B5Z8 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav6-1A0A075B5Z8 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav6-1A0A075B5Z8 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Trav6-1A0A075B5Z8 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav6-1A0A075B5Z8 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Trav6-1A0A075B5Z8 Mir770-201ENSMUST00000103252 94 ntBASIC12.42□□□□□ -0.42
Trav6-1A0A075B5Z8 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav6-1A0A075B5Z8 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav6-1A0A075B5Z8 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC12.42□□□□□ -0.42
Trav6-1A0A075B5Z8 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav6-1A0A075B5Z8 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav6-1A0A075B5Z8 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Trav6-1A0A075B5Z8 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC12.42□□□□□ -0.42
Trav6-1A0A075B5Z8 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC12.42□□□□□ -0.42
Trav6-1A0A075B5Z8 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC12.42□□□□□ -0.42
Trav6-1A0A075B5Z8 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav6-1A0A075B5Z8 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Trav6-1A0A075B5Z8 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav6-1A0A075B5Z8 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav6-1A0A075B5Z8 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Trav6-1A0A075B5Z8 Dgkq-201ENSMUST00000053913 4938 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav6-1A0A075B5Z8 Daxx-201ENSMUST00000079421 2580 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav6-1A0A075B5Z8 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Trav6-1A0A075B5Z8 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Trav6-1A0A075B5Z8 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Trav6-1A0A075B5Z8 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC12.42□□□□□ -0.42
Trav6-1A0A075B5Z8 Syk-203ENSMUST00000120135 5363 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav6-1A0A075B5Z8 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav6-1A0A075B5Z8 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Trav6-1A0A075B5Z8 Gpd1l-204ENSMUST00000146623 4391 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav6-1A0A075B5Z8 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav6-1A0A075B5Z8 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav6-1A0A075B5Z8 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav6-1A0A075B5Z8 Zbtb14-203ENSMUST00000112676 3909 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav6-1A0A075B5Z8 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav6-1A0A075B5Z8 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Trav6-1A0A075B5Z8 Pcdha1-201ENSMUST00000070797 5248 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav6-1A0A075B5Z8 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC12.41□□□□□ -0.42
Trav6-1A0A075B5Z8 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav6-1A0A075B5Z8 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav6-1A0A075B5Z8 Gm15039-201ENSMUST00000118914 875 ntBASIC12.41□□□□□ -0.42
Trav6-1A0A075B5Z8 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC12.41□□□□□ -0.42
Trav6-1A0A075B5Z8 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Trav6-1A0A075B5Z8 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Trav6-1A0A075B5Z8 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Trav6-1A0A075B5Z8 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav6-1A0A075B5Z8 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav6-1A0A075B5Z8 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Trav6-1A0A075B5Z8 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC12.41□□□□□ -0.42
Trav6-1A0A075B5Z8 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav6-1A0A075B5Z8 Irs2-201ENSMUST00000040514 6323 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav6-1A0A075B5Z8 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC12.41□□□□□ -0.42
Trav6-1A0A075B5Z8 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC12.41□□□□□ -0.42
Trav6-1A0A075B5Z8 Lurap1-201ENSMUST00000030469 5742 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav6-1A0A075B5Z8 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Trav6-1A0A075B5Z8 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav6-1A0A075B5Z8 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav6-1A0A075B5Z8 Gm45605-201ENSMUST00000210265 4269 ntBASIC12.4□□□□□ -0.42
Trav6-1A0A075B5Z8 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Trav6-1A0A075B5Z8 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav6-1A0A075B5Z8 Fzd6-202ENSMUST00000179165 4325 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav6-1A0A075B5Z8 Gm45504-201ENSMUST00000211407 2107 ntBASIC12.4□□□□□ -0.42
Trav6-1A0A075B5Z8 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav6-1A0A075B5Z8 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav6-1A0A075B5Z8 Gm8668-201ENSMUST00000120559 1447 ntBASIC12.4□□□□□ -0.42
Trav6-1A0A075B5Z8 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav6-1A0A075B5Z8 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC12.4□□□□□ -0.42
Trav6-1A0A075B5Z8 Agbl5-213ENSMUST00000201917 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav6-1A0A075B5Z8 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Trav6-1A0A075B5Z8 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC12.4□□□□□ -0.42
Trav6-1A0A075B5Z8 Gm8349-201ENSMUST00000182720 1003 ntBASIC12.4□□□□□ -0.42
Trav6-1A0A075B5Z8 Gm43799-201ENSMUST00000201845 579 ntBASIC12.4□□□□□ -0.42
Trav6-1A0A075B5Z8 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
Trav6-1A0A075B5Z8 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav6-1A0A075B5Z8 Kdm7a-201ENSMUST00000002305 9566 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav6-1A0A075B5Z8 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 45 ms