Protein–RNA interactions for Protein: Q9Z0Y9

Nr1h3, Oxysterols receptor LXR-alpha, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nr1h3Q9Z0Y9 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC16.81■□□□□ 0.28
Nr1h3Q9Z0Y9 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Nr1h3Q9Z0Y9 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Nr1h3Q9Z0Y9 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Nr1h3Q9Z0Y9 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Nr1h3Q9Z0Y9 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Nr1h3Q9Z0Y9 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Nr1h3Q9Z0Y9 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Nr1h3Q9Z0Y9 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC16.8■□□□□ 0.28
Nr1h3Q9Z0Y9 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC16.8■□□□□ 0.28
Nr1h3Q9Z0Y9 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Nr1h3Q9Z0Y9 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Nr1h3Q9Z0Y9 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Nr1h3Q9Z0Y9 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Nr1h3Q9Z0Y9 Asphd1-202ENSMUST00000106339 518 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
Nr1h3Q9Z0Y9 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC16.8■□□□□ 0.28
Nr1h3Q9Z0Y9 Tmsb4x-201ENSMUST00000112172 768 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Nr1h3Q9Z0Y9 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
Nr1h3Q9Z0Y9 Gm19430-201ENSMUST00000193847 2137 ntBASIC16.8■□□□□ 0.28
Nr1h3Q9Z0Y9 Gm44081-201ENSMUST00000204406 643 ntTSL 3 BASIC16.8■□□□□ 0.28
Nr1h3Q9Z0Y9 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC16.8■□□□□ 0.28
Nr1h3Q9Z0Y9 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Nr1h3Q9Z0Y9 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Nr1h3Q9Z0Y9 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Nr1h3Q9Z0Y9 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC16.8■□□□□ 0.28
Nr1h3Q9Z0Y9 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Nr1h3Q9Z0Y9 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Nr1h3Q9Z0Y9 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Nr1h3Q9Z0Y9 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
Nr1h3Q9Z0Y9 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Nr1h3Q9Z0Y9 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Nr1h3Q9Z0Y9 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC16.8■□□□□ 0.28
Nr1h3Q9Z0Y9 Pccb-201ENSMUST00000035116 2320 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Nr1h3Q9Z0Y9 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Nr1h3Q9Z0Y9 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Nr1h3Q9Z0Y9 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC16.8■□□□□ 0.28
Nr1h3Q9Z0Y9 Adcy7-203ENSMUST00000169037 5198 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Nr1h3Q9Z0Y9 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Nr1h3Q9Z0Y9 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
Nr1h3Q9Z0Y9 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Nr1h3Q9Z0Y9 Aanat-205ENSMUST00000153476 1353 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Nr1h3Q9Z0Y9 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Nr1h3Q9Z0Y9 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Nr1h3Q9Z0Y9 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Nr1h3Q9Z0Y9 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Nr1h3Q9Z0Y9 Ager-209ENSMUST00000174496 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Nr1h3Q9Z0Y9 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC16.79■□□□□ 0.28
Nr1h3Q9Z0Y9 Aimp2-202ENSMUST00000100483 1073 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Nr1h3Q9Z0Y9 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Nr1h3Q9Z0Y9 Mir7036b-201ENSMUST00000184791 63 ntBASIC16.79■□□□□ 0.28
Nr1h3Q9Z0Y9 Chchd1-203ENSMUST00000224633 557 ntBASIC16.79■□□□□ 0.28
Nr1h3Q9Z0Y9 AC154572.2-201ENSMUST00000225105 997 ntBASIC16.79■□□□□ 0.28
Nr1h3Q9Z0Y9 AC159295.1-201ENSMUST00000225326 940 ntBASIC16.79■□□□□ 0.28
Nr1h3Q9Z0Y9 Prdx4-201ENSMUST00000026328 990 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Nr1h3Q9Z0Y9 Aimp2-201ENSMUST00000031613 1185 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Nr1h3Q9Z0Y9 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Nr1h3Q9Z0Y9 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Nr1h3Q9Z0Y9 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Nr1h3Q9Z0Y9 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Nr1h3Q9Z0Y9 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Nr1h3Q9Z0Y9 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
Nr1h3Q9Z0Y9 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Nr1h3Q9Z0Y9 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Nr1h3Q9Z0Y9 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC16.79■□□□□ 0.28
Nr1h3Q9Z0Y9 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Nr1h3Q9Z0Y9 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Nr1h3Q9Z0Y9 Lypd1-201ENSMUST00000027582 1447 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Nr1h3Q9Z0Y9 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Nr1h3Q9Z0Y9 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Nr1h3Q9Z0Y9 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Nr1h3Q9Z0Y9 Best4-ps-201ENSMUST00000129783 1380 ntBASIC16.78■□□□□ 0.28
Nr1h3Q9Z0Y9 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
Nr1h3Q9Z0Y9 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Nr1h3Q9Z0Y9 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Nr1h3Q9Z0Y9 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Nr1h3Q9Z0Y9 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Nr1h3Q9Z0Y9 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Nr1h3Q9Z0Y9 Gemin7-204ENSMUST00000122055 609 ntAPPRIS P1 TSL 3 BASIC16.78■□□□□ 0.28
Nr1h3Q9Z0Y9 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC16.78■□□□□ 0.28
Nr1h3Q9Z0Y9 Gm15706-201ENSMUST00000139612 899 ntTSL 2 BASIC16.78■□□□□ 0.28
Nr1h3Q9Z0Y9 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Nr1h3Q9Z0Y9 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC16.78■□□□□ 0.28
Nr1h3Q9Z0Y9 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC16.78■□□□□ 0.28
Nr1h3Q9Z0Y9 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Nr1h3Q9Z0Y9 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC16.78■□□□□ 0.28
Nr1h3Q9Z0Y9 AC147366.1-201ENSMUST00000227671 852 ntBASIC16.78■□□□□ 0.28
Nr1h3Q9Z0Y9 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Nr1h3Q9Z0Y9 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Nr1h3Q9Z0Y9 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Nr1h3Q9Z0Y9 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Nr1h3Q9Z0Y9 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC16.78■□□□□ 0.28
Nr1h3Q9Z0Y9 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Nr1h3Q9Z0Y9 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Nr1h3Q9Z0Y9 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Nr1h3Q9Z0Y9 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
Nr1h3Q9Z0Y9 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC16.78■□□□□ 0.28
Nr1h3Q9Z0Y9 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC16.78■□□□□ 0.28
Nr1h3Q9Z0Y9 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Nr1h3Q9Z0Y9 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC16.77■□□□□ 0.28
Nr1h3Q9Z0Y9 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC16.77■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 48.6 ms