Protein–RNA interactions for Protein: Q9UPX8

SHANK2, SH3 and multiple ankyrin repeat domains protein 2, humanhuman

Predictions only

Length 1,470 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2Q9UPX8 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC27.23■■□□□ 1.95
SHANK2Q9UPX8 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC27.23■■□□□ 1.95
SHANK2Q9UPX8 AC116562.4-201ENST00000641316 2276 ntBASIC27.23■■□□□ 1.95
SHANK2Q9UPX8 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC27.23■■□□□ 1.95
SHANK2Q9UPX8 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC27.23■■□□□ 1.95
SHANK2Q9UPX8 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC27.22■■□□□ 1.95
SHANK2Q9UPX8 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC27.22■■□□□ 1.95
SHANK2Q9UPX8 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC27.22■■□□□ 1.95
SHANK2Q9UPX8 KIRREL3-AS3-201ENST00000404882 831 ntBASIC27.22■■□□□ 1.95
SHANK2Q9UPX8 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC27.22■■□□□ 1.95
SHANK2Q9UPX8 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC27.22■■□□□ 1.95
SHANK2Q9UPX8 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC27.22■■□□□ 1.95
SHANK2Q9UPX8 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC27.22■■□□□ 1.95
SHANK2Q9UPX8 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC27.22■■□□□ 1.95
SHANK2Q9UPX8 AC064862.7-201ENST00000604520 867 ntBASIC27.22■■□□□ 1.95
SHANK2Q9UPX8 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC27.22■■□□□ 1.95
SHANK2Q9UPX8 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
SHANK2Q9UPX8 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
SHANK2Q9UPX8 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
SHANK2Q9UPX8 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC27.22■■□□□ 1.95
SHANK2Q9UPX8 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
SHANK2Q9UPX8 IRF8-202ENST00000562492 946 ntTSL 3 BASIC27.21■■□□□ 1.95
SHANK2Q9UPX8 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC27.21■■□□□ 1.95
SHANK2Q9UPX8 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC27.21■■□□□ 1.95
SHANK2Q9UPX8 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC27.2■■□□□ 1.95
SHANK2Q9UPX8 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC27.2■■□□□ 1.95
SHANK2Q9UPX8 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.95
SHANK2Q9UPX8 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC27.2■■□□□ 1.95
SHANK2Q9UPX8 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC27.2■■□□□ 1.95
SHANK2Q9UPX8 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC27.2■■□□□ 1.95
SHANK2Q9UPX8 AL031284.1-201ENST00000419297 478 ntBASIC27.2■■□□□ 1.95
SHANK2Q9UPX8 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC27.2■■□□□ 1.95
SHANK2Q9UPX8 FAM197Y8-203ENST00000450145 560 ntBASIC27.2■■□□□ 1.95
SHANK2Q9UPX8 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC27.2■■□□□ 1.95
SHANK2Q9UPX8 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC27.2■■□□□ 1.95
SHANK2Q9UPX8 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC27.2■■□□□ 1.95
SHANK2Q9UPX8 PAM16-208ENST00000573553 722 ntTSL 2 BASIC27.2■■□□□ 1.95
SHANK2Q9UPX8 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC27.2■■□□□ 1.95
SHANK2Q9UPX8 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC27.2■■□□□ 1.94
SHANK2Q9UPX8 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC27.2■■□□□ 1.94
SHANK2Q9UPX8 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC27.2■■□□□ 1.94
SHANK2Q9UPX8 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.94
SHANK2Q9UPX8 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC27.2■■□□□ 1.94
SHANK2Q9UPX8 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC27.2■■□□□ 1.94
SHANK2Q9UPX8 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC27.2■■□□□ 1.94
SHANK2Q9UPX8 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.94
SHANK2Q9UPX8 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC27.2■■□□□ 1.94
SHANK2Q9UPX8 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC27.19■■□□□ 1.94
SHANK2Q9UPX8 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC27.19■■□□□ 1.94
SHANK2Q9UPX8 RBSN-204ENST00000449050 903 ntTSL 2 BASIC27.19■■□□□ 1.94
SHANK2Q9UPX8 AF186996.4-201ENST00000467186 377 ntBASIC27.19■■□□□ 1.94
SHANK2Q9UPX8 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC27.19■■□□□ 1.94
SHANK2Q9UPX8 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC27.19■■□□□ 1.94
SHANK2Q9UPX8 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC27.19■■□□□ 1.94
SHANK2Q9UPX8 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC27.19■■□□□ 1.94
SHANK2Q9UPX8 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
SHANK2Q9UPX8 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC27.19■■□□□ 1.94
SHANK2Q9UPX8 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC27.19■■□□□ 1.94
SHANK2Q9UPX8 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC27.19■■□□□ 1.94
SHANK2Q9UPX8 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC27.19■■□□□ 1.94
SHANK2Q9UPX8 LINC00602-201ENST00000629776 2065 ntBASIC27.19■■□□□ 1.94
SHANK2Q9UPX8 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC27.19■■□□□ 1.94
SHANK2Q9UPX8 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC27.19■■□□□ 1.94
SHANK2Q9UPX8 RBX1-201ENST00000216225 1188 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
SHANK2Q9UPX8 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC27.19■■□□□ 1.94
SHANK2Q9UPX8 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC27.19■■□□□ 1.94
SHANK2Q9UPX8 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC27.19■■□□□ 1.94
SHANK2Q9UPX8 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC27.19■■□□□ 1.94
SHANK2Q9UPX8 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
SHANK2Q9UPX8 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC27.19■■□□□ 1.94
SHANK2Q9UPX8 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC27.19■■□□□ 1.94
SHANK2Q9UPX8 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC27.19■■□□□ 1.94
SHANK2Q9UPX8 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC27.19■■□□□ 1.94
SHANK2Q9UPX8 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC27.19■■□□□ 1.94
SHANK2Q9UPX8 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC27.19■■□□□ 1.94
SHANK2Q9UPX8 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
SHANK2Q9UPX8 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC27.18■■□□□ 1.94
SHANK2Q9UPX8 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC27.18■■□□□ 1.94
SHANK2Q9UPX8 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
SHANK2Q9UPX8 MED16-201ENST00000269814 1199 ntTSL 5 BASIC27.18■■□□□ 1.94
SHANK2Q9UPX8 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC27.18■■□□□ 1.94
SHANK2Q9UPX8 KRT18P58-201ENST00000527480 1120 ntBASIC27.18■■□□□ 1.94
SHANK2Q9UPX8 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC27.18■■□□□ 1.94
SHANK2Q9UPX8 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC27.18■■□□□ 1.94
SHANK2Q9UPX8 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC27.18■■□□□ 1.94
SHANK2Q9UPX8 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC27.18■■□□□ 1.94
SHANK2Q9UPX8 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC27.18■■□□□ 1.94
SHANK2Q9UPX8 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
SHANK2Q9UPX8 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC27.18■■□□□ 1.94
SHANK2Q9UPX8 AC132938.6-201ENST00000623828 1655 ntBASIC27.17■■□□□ 1.94
SHANK2Q9UPX8 AC022898.2-201ENST00000616822 1312 ntBASIC27.17■■□□□ 1.94
SHANK2Q9UPX8 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC27.17■■□□□ 1.94
SHANK2Q9UPX8 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC27.17■■□□□ 1.94
SHANK2Q9UPX8 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC27.17■■□□□ 1.94
SHANK2Q9UPX8 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC27.17■■□□□ 1.94
SHANK2Q9UPX8 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC27.17■■□□□ 1.94
SHANK2Q9UPX8 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC27.17■■□□□ 1.94
SHANK2Q9UPX8 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC27.17■■□□□ 1.94
SHANK2Q9UPX8 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC27.17■■□□□ 1.94
SHANK2Q9UPX8 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC27.17■■□□□ 1.94
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms