Protein–RNA interactions for Protein: Q9R1N9

Col13a1, Collagen alpha-1(XIII) chain, mousemouse

Predictions only

Length 751 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col13a1Q9R1N9 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Col13a1Q9R1N9 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Col13a1Q9R1N9 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Col13a1Q9R1N9 Meig1-203ENSMUST00000115082 603 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Col13a1Q9R1N9 Gm13365-201ENSMUST00000121188 973 ntBASIC13.17□□□□□ -0.3
Col13a1Q9R1N9 Slc7a10-203ENSMUST00000135452 629 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Col13a1Q9R1N9 4930544D05Rik-203ENSMUST00000144960 624 ntAPPRIS P2 TSL 5 BASIC13.17□□□□□ -0.3
Col13a1Q9R1N9 Gm16163-201ENSMUST00000161868 1119 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Col13a1Q9R1N9 Gm17968-201ENSMUST00000194902 784 ntBASIC13.17□□□□□ -0.3
Col13a1Q9R1N9 Gm35911-201ENSMUST00000198837 677 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Col13a1Q9R1N9 Gm31816-201ENSMUST00000209388 1294 ntTSL 5 BASIC13.17□□□□□ -0.3
Col13a1Q9R1N9 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC13.17□□□□□ -0.3
Col13a1Q9R1N9 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Col13a1Q9R1N9 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Col13a1Q9R1N9 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Col13a1Q9R1N9 Slc39a14-201ENSMUST00000022688 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Col13a1Q9R1N9 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Col13a1Q9R1N9 Fbxo28-201ENSMUST00000051431 4925 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Col13a1Q9R1N9 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC13.17□□□□□ -0.3
Col13a1Q9R1N9 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC13.17□□□□□ -0.3
Col13a1Q9R1N9 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Col13a1Q9R1N9 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Col13a1Q9R1N9 Gm44443-201ENSMUST00000204396 5633 ntBASIC13.16□□□□□ -0.3
Col13a1Q9R1N9 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Col13a1Q9R1N9 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Col13a1Q9R1N9 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Col13a1Q9R1N9 Efcab8-203ENSMUST00000175856 1703 ntAPPRIS ALT2 TSL 2 BASIC13.16□□□□□ -0.3
Col13a1Q9R1N9 Phyhd1-204ENSMUST00000113645 1325 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Col13a1Q9R1N9 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Col13a1Q9R1N9 Brd2-203ENSMUST00000114242 4483 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Col13a1Q9R1N9 Synm-204ENSMUST00000208231 4457 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Col13a1Q9R1N9 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Col13a1Q9R1N9 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Col13a1Q9R1N9 Wtap-201ENSMUST00000007007 2051 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Col13a1Q9R1N9 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Col13a1Q9R1N9 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Col13a1Q9R1N9 Lcn5-202ENSMUST00000100312 660 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Col13a1Q9R1N9 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC13.16□□□□□ -0.3
Col13a1Q9R1N9 Gm14493-201ENSMUST00000141174 543 ntTSL 5 BASIC13.16□□□□□ -0.3
Col13a1Q9R1N9 Gm25406-201ENSMUST00000157599 105 ntBASIC13.16□□□□□ -0.3
Col13a1Q9R1N9 1700086L19Rik-202ENSMUST00000185822 1028 ntTSL 3 BASIC13.16□□□□□ -0.3
Col13a1Q9R1N9 Snapc2-203ENSMUST00000208316 1190 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Col13a1Q9R1N9 9430081H08Rik-201ENSMUST00000217460 818 ntBASIC13.16□□□□□ -0.3
Col13a1Q9R1N9 AC154572.2-201ENSMUST00000225105 997 ntBASIC13.16□□□□□ -0.3
Col13a1Q9R1N9 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Col13a1Q9R1N9 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Col13a1Q9R1N9 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Col13a1Q9R1N9 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Col13a1Q9R1N9 Sirt5-211ENSMUST00000223194 1398 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Col13a1Q9R1N9 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Col13a1Q9R1N9 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Col13a1Q9R1N9 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC13.16□□□□□ -0.3
Col13a1Q9R1N9 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Col13a1Q9R1N9 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Col13a1Q9R1N9 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Col13a1Q9R1N9 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Col13a1Q9R1N9 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC13.15□□□□□ -0.3
Col13a1Q9R1N9 D430041D05Rik-201ENSMUST00000089726 10124 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Col13a1Q9R1N9 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC13.15□□□□□ -0.3
Col13a1Q9R1N9 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Col13a1Q9R1N9 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Col13a1Q9R1N9 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Col13a1Q9R1N9 Aimp2-202ENSMUST00000100483 1073 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Col13a1Q9R1N9 Gm11724-201ENSMUST00000125577 472 ntTSL 2 BASIC13.15□□□□□ -0.3
Col13a1Q9R1N9 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Col13a1Q9R1N9 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Col13a1Q9R1N9 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC13.15□□□□□ -0.3
Col13a1Q9R1N9 Gm18622-201ENSMUST00000219361 595 ntBASIC13.15□□□□□ -0.3
Col13a1Q9R1N9 AC131187.1-201ENSMUST00000224567 809 ntBASIC13.15□□□□□ -0.3
Col13a1Q9R1N9 Cks1b-201ENSMUST00000029679 849 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Col13a1Q9R1N9 Aimp2-201ENSMUST00000031613 1185 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Col13a1Q9R1N9 Spsb2-201ENSMUST00000047760 1213 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Col13a1Q9R1N9 Pcna-ps2-201ENSMUST00000088040 1257 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
Col13a1Q9R1N9 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC13.15□□□□□ -0.3
Col13a1Q9R1N9 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Col13a1Q9R1N9 Rab3a-202ENSMUST00000110090 1375 ntAPPRIS P1 TSL 3 BASIC13.15□□□□□ -0.3
Col13a1Q9R1N9 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Col13a1Q9R1N9 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Col13a1Q9R1N9 Itga3-201ENSMUST00000001548 4861 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Col13a1Q9R1N9 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Col13a1Q9R1N9 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
Col13a1Q9R1N9 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC13.15□□□□□ -0.31
Col13a1Q9R1N9 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
Col13a1Q9R1N9 Pitpnm2-209ENSMUST00000161938 5866 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.31
Col13a1Q9R1N9 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Col13a1Q9R1N9 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Col13a1Q9R1N9 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Col13a1Q9R1N9 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Col13a1Q9R1N9 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Col13a1Q9R1N9 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Col13a1Q9R1N9 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Col13a1Q9R1N9 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Col13a1Q9R1N9 Anks1-201ENSMUST00000025058 6844 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Col13a1Q9R1N9 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Col13a1Q9R1N9 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Col13a1Q9R1N9 Vamp2-202ENSMUST00000117780 1113 ntTSL 2 BASIC13.14□□□□□ -0.31
Col13a1Q9R1N9 Pam16-201ENSMUST00000014445 596 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Col13a1Q9R1N9 Rpl26-206ENSMUST00000167436 606 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Col13a1Q9R1N9 Gm25948-201ENSMUST00000175334 112 ntBASIC13.14□□□□□ -0.31
Col13a1Q9R1N9 Gm26935-201ENSMUST00000182686 519 ntTSL 5 BASIC13.14□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 30.4 ms