Protein–RNA interactions for Protein: Q9QZ28

Six6, Homeobox protein SIX6, mousemouse

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six6Q9QZ28 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Six6Q9QZ28 Ankrd23-202ENSMUST00000193083 2277 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Six6Q9QZ28 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Six6Q9QZ28 Edn3-201ENSMUST00000029030 3117 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Six6Q9QZ28 Iqgap1-201ENSMUST00000167377 7444 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Six6Q9QZ28 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Six6Q9QZ28 AC154855.1-201ENSMUST00000227353 1458 ntBASIC13.17□□□□□ -0.3
Six6Q9QZ28 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Six6Q9QZ28 Cct4-204ENSMUST00000173867 2484 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Six6Q9QZ28 Mdfic-203ENSMUST00000125326 3635 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Six6Q9QZ28 Dis3-201ENSMUST00000042471 5150 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Six6Q9QZ28 Zfp264-201ENSMUST00000208656 1563 ntBASIC13.17□□□□□ -0.3
Six6Q9QZ28 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Six6Q9QZ28 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Six6Q9QZ28 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC13.17□□□□□ -0.3
Six6Q9QZ28 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Six6Q9QZ28 Gm12085-201ENSMUST00000119263 940 ntBASIC13.17□□□□□ -0.3
Six6Q9QZ28 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC13.17□□□□□ -0.3
Six6Q9QZ28 Mir5133-201ENSMUST00000174955 77 ntBASIC13.17□□□□□ -0.3
Six6Q9QZ28 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC13.17□□□□□ -0.3
Six6Q9QZ28 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Six6Q9QZ28 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Six6Q9QZ28 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Six6Q9QZ28 F11r-201ENSMUST00000043839 2518 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Six6Q9QZ28 Chtf18-201ENSMUST00000048054 3214 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Six6Q9QZ28 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Six6Q9QZ28 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Six6Q9QZ28 Mfsd6-201ENSMUST00000087701 3493 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Six6Q9QZ28 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Six6Q9QZ28 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Six6Q9QZ28 Nupl1-207ENSMUST00000225311 2475 ntBASIC13.17□□□□□ -0.3
Six6Q9QZ28 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Six6Q9QZ28 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Six6Q9QZ28 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Six6Q9QZ28 Slc4a2-201ENSMUST00000080067 4179 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Six6Q9QZ28 Gm26852-201ENSMUST00000180691 5751 ntTSL 5 BASIC13.17□□□□□ -0.3
Six6Q9QZ28 Vwa2-201ENSMUST00000026068 4049 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Six6Q9QZ28 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Six6Q9QZ28 Yod1-201ENSMUST00000049813 6128 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Six6Q9QZ28 Galnt2-201ENSMUST00000034458 4113 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Six6Q9QZ28 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Six6Q9QZ28 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Six6Q9QZ28 AC148324.1-201ENSMUST00000219034 4240 ntBASIC13.16□□□□□ -0.3
Six6Q9QZ28 Adamts15-201ENSMUST00000065112 5928 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Six6Q9QZ28 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC13.16□□□□□ -0.3
Six6Q9QZ28 Usp1-202ENSMUST00000091358 3527 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Six6Q9QZ28 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC13.16□□□□□ -0.3
Six6Q9QZ28 Il1rn-204ENSMUST00000114487 2474 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Six6Q9QZ28 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC13.16□□□□□ -0.3
Six6Q9QZ28 Mbp-203ENSMUST00000075372 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Six6Q9QZ28 Mtrr-209ENSMUST00000223398 3861 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Six6Q9QZ28 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Six6Q9QZ28 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC13.16□□□□□ -0.3
Six6Q9QZ28 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC13.16□□□□□ -0.3
Six6Q9QZ28 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Six6Q9QZ28 Gm13186-201ENSMUST00000118031 316 ntBASIC13.16□□□□□ -0.3
Six6Q9QZ28 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Six6Q9QZ28 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Six6Q9QZ28 AC167013.2-201ENSMUST00000228520 2684 ntBASIC13.16□□□□□ -0.3
Six6Q9QZ28 Mfrp-202ENSMUST00000161381 4254 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Six6Q9QZ28 Cul7-201ENSMUST00000043464 5530 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Six6Q9QZ28 Pex12-202ENSMUST00000108146 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Six6Q9QZ28 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Six6Q9QZ28 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Six6Q9QZ28 Lrp11-203ENSMUST00000130590 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Six6Q9QZ28 Srpx-201ENSMUST00000044789 2477 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Six6Q9QZ28 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Six6Q9QZ28 B3gnt7-201ENSMUST00000113306 2582 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Six6Q9QZ28 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC13.16□□□□□ -0.3
Six6Q9QZ28 Selenon-201ENSMUST00000060435 3445 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Six6Q9QZ28 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Six6Q9QZ28 Acin1-201ENSMUST00000022793 4735 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Six6Q9QZ28 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Six6Q9QZ28 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Six6Q9QZ28 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Six6Q9QZ28 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Six6Q9QZ28 Gpr153-202ENSMUST00000105650 3838 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Six6Q9QZ28 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Six6Q9QZ28 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Six6Q9QZ28 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Six6Q9QZ28 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Six6Q9QZ28 Apol8-202ENSMUST00000089450 2498 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Six6Q9QZ28 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Six6Q9QZ28 Adamts7-201ENSMUST00000113059 5379 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Six6Q9QZ28 Mkrn1-201ENSMUST00000031985 3046 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Six6Q9QZ28 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
Six6Q9QZ28 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
Six6Q9QZ28 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Six6Q9QZ28 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC13.15□□□□□ -0.3
Six6Q9QZ28 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Six6Q9QZ28 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Six6Q9QZ28 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Six6Q9QZ28 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Six6Q9QZ28 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Six6Q9QZ28 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
Six6Q9QZ28 Pafah1b1-202ENSMUST00000102520 5789 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Six6Q9QZ28 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Six6Q9QZ28 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Six6Q9QZ28 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC13.15□□□□□ -0.3
Six6Q9QZ28 Arid4b-203ENSMUST00000110534 5864 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 19.3 ms