Protein–RNA interactions for Protein: Q9EQM3

Nkx2-4, Homeobox protein Nkx-2.4, mousemouse

Predictions only

Length 354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-4Q9EQM3 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC15.83■□□□□ 0.12
Nkx2-4Q9EQM3 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Nkx2-4Q9EQM3 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Nkx2-4Q9EQM3 Ggt6-203ENSMUST00000108499 874 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Nkx2-4Q9EQM3 Mrpl53-201ENSMUST00000113938 695 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Nkx2-4Q9EQM3 Gm14719-201ENSMUST00000121891 340 ntBASIC15.83■□□□□ 0.12
Nkx2-4Q9EQM3 Meg3-208ENSMUST00000143847 706 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Nkx2-4Q9EQM3 Cdk2ap2-204ENSMUST00000174514 669 ntTSL 2 BASIC15.83■□□□□ 0.12
Nkx2-4Q9EQM3 Gm37596-201ENSMUST00000193565 1021 ntAPPRIS P1 BASIC15.83■□□□□ 0.12
Nkx2-4Q9EQM3 Phgr1-201ENSMUST00000061360 538 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
Nkx2-4Q9EQM3 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC15.83■□□□□ 0.12
Nkx2-4Q9EQM3 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC15.83■□□□□ 0.12
Nkx2-4Q9EQM3 Tex13a-201ENSMUST00000096314 1317 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Nkx2-4Q9EQM3 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Nkx2-4Q9EQM3 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC15.83■□□□□ 0.12
Nkx2-4Q9EQM3 Akt2-ps-201ENSMUST00000120718 1449 ntBASIC15.83■□□□□ 0.12
Nkx2-4Q9EQM3 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Nkx2-4Q9EQM3 Ldoc1-201ENSMUST00000075983 1459 ntAPPRIS P1 BASIC15.83■□□□□ 0.12
Nkx2-4Q9EQM3 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Nkx2-4Q9EQM3 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Nkx2-4Q9EQM3 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Nkx2-4Q9EQM3 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Nkx2-4Q9EQM3 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Nkx2-4Q9EQM3 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
Nkx2-4Q9EQM3 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Nkx2-4Q9EQM3 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC15.82■□□□□ 0.12
Nkx2-4Q9EQM3 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Nkx2-4Q9EQM3 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
Nkx2-4Q9EQM3 Tpd52-206ENSMUST00000121038 849 ntTSL 5 BASIC15.82■□□□□ 0.12
Nkx2-4Q9EQM3 Erdr1-204ENSMUST00000179483 688 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Nkx2-4Q9EQM3 Gm37667-201ENSMUST00000193103 752 ntTSL 5 BASIC15.82■□□□□ 0.12
Nkx2-4Q9EQM3 Gm38293-201ENSMUST00000193209 600 ntTSL 2 BASIC15.82■□□□□ 0.12
Nkx2-4Q9EQM3 Slc10a7-204ENSMUST00000209992 939 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Nkx2-4Q9EQM3 Letm2-213ENSMUST00000211422 738 ntTSL 5 BASIC15.82■□□□□ 0.12
Nkx2-4Q9EQM3 Commd9-201ENSMUST00000028584 1191 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Nkx2-4Q9EQM3 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Nkx2-4Q9EQM3 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Nkx2-4Q9EQM3 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Nkx2-4Q9EQM3 Gm26681-201ENSMUST00000180851 1440 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Nkx2-4Q9EQM3 Zfyve19-202ENSMUST00000102519 1505 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Nkx2-4Q9EQM3 Twf2-204ENSMUST00000188650 1508 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Nkx2-4Q9EQM3 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Nkx2-4Q9EQM3 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
Nkx2-4Q9EQM3 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Nkx2-4Q9EQM3 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC15.81■□□□□ 0.12
Nkx2-4Q9EQM3 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
Nkx2-4Q9EQM3 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Nkx2-4Q9EQM3 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Nkx2-4Q9EQM3 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Nkx2-4Q9EQM3 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Nkx2-4Q9EQM3 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Nkx2-4Q9EQM3 Ntan1-202ENSMUST00000115805 984 ntTSL 3 BASIC15.81■□□□□ 0.12
Nkx2-4Q9EQM3 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
Nkx2-4Q9EQM3 Gm14928-201ENSMUST00000120198 477 ntBASIC15.81■□□□□ 0.12
Nkx2-4Q9EQM3 D11Bhm181e-201ENSMUST00000122252 282 ntBASIC15.81■□□□□ 0.12
Nkx2-4Q9EQM3 Gm15199-201ENSMUST00000129933 542 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Nkx2-4Q9EQM3 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Nkx2-4Q9EQM3 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Nkx2-4Q9EQM3 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Nkx2-4Q9EQM3 Gm20650-201ENSMUST00000175690 198 ntTSL 3 BASIC15.81■□□□□ 0.12
Nkx2-4Q9EQM3 Gm25144-201ENSMUST00000179561 110 ntBASIC15.81■□□□□ 0.12
Nkx2-4Q9EQM3 Gm25352-201ENSMUST00000179815 110 ntBASIC15.81■□□□□ 0.12
Nkx2-4Q9EQM3 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC15.81■□□□□ 0.12
Nkx2-4Q9EQM3 Gm9063-201ENSMUST00000223299 582 ntBASIC15.81■□□□□ 0.12
Nkx2-4Q9EQM3 Syt7-204ENSMUST00000223586 1344 ntBASIC15.81■□□□□ 0.12
Nkx2-4Q9EQM3 Aif1-201ENSMUST00000025257 847 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
Nkx2-4Q9EQM3 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Nkx2-4Q9EQM3 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Nkx2-4Q9EQM3 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Nkx2-4Q9EQM3 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
Nkx2-4Q9EQM3 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Nkx2-4Q9EQM3 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Nkx2-4Q9EQM3 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
Nkx2-4Q9EQM3 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Nkx2-4Q9EQM3 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Nkx2-4Q9EQM3 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
Nkx2-4Q9EQM3 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
Nkx2-4Q9EQM3 Gata1-201ENSMUST00000033502 1902 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Nkx2-4Q9EQM3 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC15.8■□□□□ 0.12
Nkx2-4Q9EQM3 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC15.8■□□□□ 0.12
Nkx2-4Q9EQM3 Tmem199-201ENSMUST00000052566 1347 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Nkx2-4Q9EQM3 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Nkx2-4Q9EQM3 Ighv5-17-201ENSMUST00000103459 405 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
Nkx2-4Q9EQM3 4930527A07Rik-201ENSMUST00000130677 559 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Nkx2-4Q9EQM3 Gm43691-201ENSMUST00000196625 697 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Nkx2-4Q9EQM3 4933437G19Rik-201ENSMUST00000197910 1178 ntBASIC15.8■□□□□ 0.12
Nkx2-4Q9EQM3 AC132863.2-201ENSMUST00000226643 799 ntBASIC15.8■□□□□ 0.12
Nkx2-4Q9EQM3 Epo-201ENSMUST00000031723 715 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
Nkx2-4Q9EQM3 Gstp2-201ENSMUST00000042700 770 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Nkx2-4Q9EQM3 Mlf1-202ENSMUST00000077916 1114 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Nkx2-4Q9EQM3 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Nkx2-4Q9EQM3 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Nkx2-4Q9EQM3 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Nkx2-4Q9EQM3 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
Nkx2-4Q9EQM3 Gm16401-202ENSMUST00000197463 2074 ntBASIC15.8■□□□□ 0.12
Nkx2-4Q9EQM3 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Nkx2-4Q9EQM3 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Nkx2-4Q9EQM3 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
Nkx2-4Q9EQM3 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Nkx2-4Q9EQM3 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 41.9 ms