Protein–RNA interactions for Protein: Q9CXF7

Chd1l, Chromodomain-helicase-DNA-binding protein 1-like, mousemouse

Predictions only

Length 900 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd1lQ9CXF7 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Chd1lQ9CXF7 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Chd1lQ9CXF7 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Chd1lQ9CXF7 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Chd1lQ9CXF7 Pim1-201ENSMUST00000024811 2638 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Chd1lQ9CXF7 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Chd1lQ9CXF7 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Chd1lQ9CXF7 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC17.53■□□□□ 0.4
Chd1lQ9CXF7 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Chd1lQ9CXF7 Drd5-201ENSMUST00000041646 3152 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
Chd1lQ9CXF7 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC17.53■□□□□ 0.4
Chd1lQ9CXF7 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Chd1lQ9CXF7 Dlgap1-207ENSMUST00000133983 7173 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Chd1lQ9CXF7 Zcchc3-201ENSMUST00000099207 3073 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
Chd1lQ9CXF7 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Chd1lQ9CXF7 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Chd1lQ9CXF7 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
Chd1lQ9CXF7 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
Chd1lQ9CXF7 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC17.53■□□□□ 0.4
Chd1lQ9CXF7 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Chd1lQ9CXF7 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC17.53■□□□□ 0.4
Chd1lQ9CXF7 CT009713.7-201ENSMUST00000224689 571 ntBASIC17.53■□□□□ 0.4
Chd1lQ9CXF7 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Chd1lQ9CXF7 Nid1-201ENSMUST00000005532 6091 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Chd1lQ9CXF7 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
Chd1lQ9CXF7 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Chd1lQ9CXF7 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Chd1lQ9CXF7 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Chd1lQ9CXF7 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
Chd1lQ9CXF7 Tmem26-201ENSMUST00000080995 5048 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Chd1lQ9CXF7 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Chd1lQ9CXF7 Tspan15-201ENSMUST00000047883 3638 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Chd1lQ9CXF7 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
Chd1lQ9CXF7 Chtf18-201ENSMUST00000048054 3214 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Chd1lQ9CXF7 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Chd1lQ9CXF7 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC17.52■□□□□ 0.4
Chd1lQ9CXF7 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC17.52■□□□□ 0.4
Chd1lQ9CXF7 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
Chd1lQ9CXF7 Mir6404-201ENSMUST00000183699 94 ntBASIC17.52■□□□□ 0.4
Chd1lQ9CXF7 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC17.52■□□□□ 0.4
Chd1lQ9CXF7 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Chd1lQ9CXF7 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Chd1lQ9CXF7 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Chd1lQ9CXF7 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Chd1lQ9CXF7 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Chd1lQ9CXF7 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Chd1lQ9CXF7 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.39
Chd1lQ9CXF7 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.39
Chd1lQ9CXF7 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Chd1lQ9CXF7 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Chd1lQ9CXF7 Cfl1-202ENSMUST00000209469 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Chd1lQ9CXF7 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC17.52■□□□□ 0.39
Chd1lQ9CXF7 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC17.52■□□□□ 0.39
Chd1lQ9CXF7 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.39
Chd1lQ9CXF7 Aqp11-205ENSMUST00000206389 3737 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Chd1lQ9CXF7 Gm12620-201ENSMUST00000119791 1986 ntBASIC17.51■□□□□ 0.39
Chd1lQ9CXF7 Gm12612-201ENSMUST00000140182 1986 ntBASIC17.51■□□□□ 0.39
Chd1lQ9CXF7 Gm43509-201ENSMUST00000196551 2594 ntBASIC17.51■□□□□ 0.39
Chd1lQ9CXF7 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Chd1lQ9CXF7 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Chd1lQ9CXF7 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC17.51■□□□□ 0.39
Chd1lQ9CXF7 Eif4g3-205ENSMUST00000105831 6235 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
Chd1lQ9CXF7 Gm13168-201ENSMUST00000121771 632 ntBASIC17.51■□□□□ 0.39
Chd1lQ9CXF7 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Chd1lQ9CXF7 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Chd1lQ9CXF7 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC17.51■□□□□ 0.39
Chd1lQ9CXF7 Gm2274-201ENSMUST00000184539 609 ntBASIC17.51■□□□□ 0.39
Chd1lQ9CXF7 Uvrag-201ENSMUST00000037968 5157 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Chd1lQ9CXF7 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC17.51■□□□□ 0.39
Chd1lQ9CXF7 Emilin3-201ENSMUST00000057169 3547 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
Chd1lQ9CXF7 Leng9-201ENSMUST00000058358 2460 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
Chd1lQ9CXF7 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
Chd1lQ9CXF7 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Chd1lQ9CXF7 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Chd1lQ9CXF7 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC17.51■□□□□ 0.39
Chd1lQ9CXF7 Brd2-203ENSMUST00000114242 4483 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Chd1lQ9CXF7 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Chd1lQ9CXF7 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
Chd1lQ9CXF7 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Chd1lQ9CXF7 Edn3-201ENSMUST00000029030 3117 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Chd1lQ9CXF7 Fam163b-201ENSMUST00000151224 2959 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Chd1lQ9CXF7 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Chd1lQ9CXF7 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
Chd1lQ9CXF7 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
Chd1lQ9CXF7 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Chd1lQ9CXF7 Tor1aip2-205ENSMUST00000111757 6118 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Chd1lQ9CXF7 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Chd1lQ9CXF7 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Chd1lQ9CXF7 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
Chd1lQ9CXF7 Fbxl19-207ENSMUST00000206893 3449 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
Chd1lQ9CXF7 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC17.5■□□□□ 0.39
Chd1lQ9CXF7 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC17.5■□□□□ 0.39
Chd1lQ9CXF7 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Chd1lQ9CXF7 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC17.5■□□□□ 0.39
Chd1lQ9CXF7 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Chd1lQ9CXF7 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Chd1lQ9CXF7 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC17.5■□□□□ 0.39
Chd1lQ9CXF7 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC17.5■□□□□ 0.39
Chd1lQ9CXF7 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Chd1lQ9CXF7 Gm45546-201ENSMUST00000211053 2394 ntBASIC17.5■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 19.5 ms