Protein–RNA interactions for Protein: Q920F6

Smc1b, Structural maintenance of chromosomes protein 1B, mousemouse

Predictions only

Length 1,248 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1bQ920F6 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Smc1bQ920F6 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC17.85■□□□□ 0.45
Smc1bQ920F6 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Smc1bQ920F6 Timm13-201ENSMUST00000020440 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Smc1bQ920F6 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC17.85■□□□□ 0.45
Smc1bQ920F6 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC17.85■□□□□ 0.45
Smc1bQ920F6 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC17.85■□□□□ 0.45
Smc1bQ920F6 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Smc1bQ920F6 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Smc1bQ920F6 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Smc1bQ920F6 Tspan31-201ENSMUST00000060991 1556 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Smc1bQ920F6 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Smc1bQ920F6 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC17.85■□□□□ 0.45
Smc1bQ920F6 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Smc1bQ920F6 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Smc1bQ920F6 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Smc1bQ920F6 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
Smc1bQ920F6 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
Smc1bQ920F6 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Smc1bQ920F6 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
Smc1bQ920F6 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
Smc1bQ920F6 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Smc1bQ920F6 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Smc1bQ920F6 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
Smc1bQ920F6 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
Smc1bQ920F6 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Smc1bQ920F6 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Smc1bQ920F6 P2rx6-203ENSMUST00000171002 1353 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Smc1bQ920F6 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Smc1bQ920F6 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
Smc1bQ920F6 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Smc1bQ920F6 Asphd1-202ENSMUST00000106339 518 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
Smc1bQ920F6 Adprm-201ENSMUST00000116363 1283 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Smc1bQ920F6 H2-Bl-209ENSMUST00000194244 862 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Smc1bQ920F6 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC17.84■□□□□ 0.45
Smc1bQ920F6 Olfr30-201ENSMUST00000055204 1066 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
Smc1bQ920F6 Gm8396-201ENSMUST00000057361 823 ntBASIC17.84■□□□□ 0.45
Smc1bQ920F6 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Smc1bQ920F6 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Smc1bQ920F6 1700086L19Rik-201ENSMUST00000095617 706 ntBASIC17.84■□□□□ 0.45
Smc1bQ920F6 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Smc1bQ920F6 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC17.84■□□□□ 0.45
Smc1bQ920F6 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Smc1bQ920F6 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Smc1bQ920F6 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Smc1bQ920F6 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Smc1bQ920F6 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Smc1bQ920F6 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Smc1bQ920F6 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
Smc1bQ920F6 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.45
Smc1bQ920F6 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Smc1bQ920F6 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Smc1bQ920F6 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.45
Smc1bQ920F6 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Smc1bQ920F6 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Smc1bQ920F6 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
Smc1bQ920F6 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Smc1bQ920F6 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
Smc1bQ920F6 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Smc1bQ920F6 Acyp1-203ENSMUST00000117138 735 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
Smc1bQ920F6 Gm25406-201ENSMUST00000157599 105 ntBASIC17.83■□□□□ 0.44
Smc1bQ920F6 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC17.83■□□□□ 0.44
Smc1bQ920F6 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Smc1bQ920F6 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC17.83■□□□□ 0.44
Smc1bQ920F6 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Smc1bQ920F6 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Smc1bQ920F6 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Smc1bQ920F6 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
Smc1bQ920F6 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Smc1bQ920F6 Chst11-201ENSMUST00000040110 5527 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Smc1bQ920F6 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Smc1bQ920F6 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Smc1bQ920F6 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Smc1bQ920F6 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC17.82■□□□□ 0.44
Smc1bQ920F6 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC17.82■□□□□ 0.44
Smc1bQ920F6 Nup188-205ENSMUST00000138666 534 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Smc1bQ920F6 Gm17271-201ENSMUST00000165535 355 ntBASIC17.82■□□□□ 0.44
Smc1bQ920F6 Gm44945-201ENSMUST00000206764 1187 ntBASIC17.82■□□□□ 0.44
Smc1bQ920F6 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC17.82■□□□□ 0.44
Smc1bQ920F6 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC17.82■□□□□ 0.44
Smc1bQ920F6 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
Smc1bQ920F6 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
Smc1bQ920F6 Gm43072-201ENSMUST00000200283 1671 ntBASIC17.82■□□□□ 0.44
Smc1bQ920F6 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Smc1bQ920F6 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Smc1bQ920F6 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
Smc1bQ920F6 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC17.82■□□□□ 0.44
Smc1bQ920F6 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Smc1bQ920F6 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Smc1bQ920F6 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC17.82■□□□□ 0.44
Smc1bQ920F6 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
Smc1bQ920F6 Appl1-201ENSMUST00000036570 7642 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Smc1bQ920F6 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Smc1bQ920F6 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
Smc1bQ920F6 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Smc1bQ920F6 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Smc1bQ920F6 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Smc1bQ920F6 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
Smc1bQ920F6 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Smc1bQ920F6 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 41.9 ms