Protein–RNA interactions for Protein: Q8VIK1

Snrnp25, U11/U12 small nuclear ribonucleoprotein 25 kDa protein, mousemouse

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snrnp25Q8VIK1 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Snrnp25Q8VIK1 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Snrnp25Q8VIK1 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Snrnp25Q8VIK1 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Snrnp25Q8VIK1 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
Snrnp25Q8VIK1 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Snrnp25Q8VIK1 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
Snrnp25Q8VIK1 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
Snrnp25Q8VIK1 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Snrnp25Q8VIK1 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Snrnp25Q8VIK1 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Snrnp25Q8VIK1 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Snrnp25Q8VIK1 Zkscan3-208ENSMUST00000224820 5398 ntBASIC16.21■□□□□ 0.19
Snrnp25Q8VIK1 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Snrnp25Q8VIK1 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Snrnp25Q8VIK1 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Snrnp25Q8VIK1 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Snrnp25Q8VIK1 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Snrnp25Q8VIK1 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Snrnp25Q8VIK1 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Snrnp25Q8VIK1 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Snrnp25Q8VIK1 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
Snrnp25Q8VIK1 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Snrnp25Q8VIK1 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Snrnp25Q8VIK1 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC16.21■□□□□ 0.19
Snrnp25Q8VIK1 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Snrnp25Q8VIK1 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC16.21■□□□□ 0.19
Snrnp25Q8VIK1 Gm18489-201ENSMUST00000172565 551 ntBASIC16.21■□□□□ 0.19
Snrnp25Q8VIK1 Gm8318-201ENSMUST00000182954 872 ntBASIC16.21■□□□□ 0.19
Snrnp25Q8VIK1 Gm5253-201ENSMUST00000187104 1025 ntBASIC16.21■□□□□ 0.19
Snrnp25Q8VIK1 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Snrnp25Q8VIK1 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Snrnp25Q8VIK1 AC151836.1-202ENSMUST00000226259 753 ntBASIC16.21■□□□□ 0.19
Snrnp25Q8VIK1 Olfr30-201ENSMUST00000055204 1066 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
Snrnp25Q8VIK1 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Snrnp25Q8VIK1 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Snrnp25Q8VIK1 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Snrnp25Q8VIK1 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Snrnp25Q8VIK1 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Snrnp25Q8VIK1 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Snrnp25Q8VIK1 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC16.21■□□□□ 0.19
Snrnp25Q8VIK1 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Snrnp25Q8VIK1 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC16.21■□□□□ 0.19
Snrnp25Q8VIK1 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Snrnp25Q8VIK1 AC154527.4-201ENSMUST00000224364 1667 ntBASIC16.21■□□□□ 0.18
Snrnp25Q8VIK1 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.18
Snrnp25Q8VIK1 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC16.21■□□□□ 0.18
Snrnp25Q8VIK1 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
Snrnp25Q8VIK1 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Snrnp25Q8VIK1 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC16.2■□□□□ 0.18
Snrnp25Q8VIK1 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC16.2■□□□□ 0.18
Snrnp25Q8VIK1 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Snrnp25Q8VIK1 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Snrnp25Q8VIK1 Zgpat-201ENSMUST00000029105 2293 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Snrnp25Q8VIK1 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC16.2■□□□□ 0.18
Snrnp25Q8VIK1 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC16.2■□□□□ 0.18
Snrnp25Q8VIK1 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Snrnp25Q8VIK1 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC16.2■□□□□ 0.18
Snrnp25Q8VIK1 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Snrnp25Q8VIK1 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Snrnp25Q8VIK1 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC16.2■□□□□ 0.18
Snrnp25Q8VIK1 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC16.2■□□□□ 0.18
Snrnp25Q8VIK1 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC16.2■□□□□ 0.18
Snrnp25Q8VIK1 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC16.2■□□□□ 0.18
Snrnp25Q8VIK1 Gm9682-201ENSMUST00000197505 556 ntBASIC16.2■□□□□ 0.18
Snrnp25Q8VIK1 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC16.2■□□□□ 0.18
Snrnp25Q8VIK1 AC147366.1-201ENSMUST00000227671 852 ntBASIC16.2■□□□□ 0.18
Snrnp25Q8VIK1 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Snrnp25Q8VIK1 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Snrnp25Q8VIK1 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Snrnp25Q8VIK1 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Snrnp25Q8VIK1 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Snrnp25Q8VIK1 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
Snrnp25Q8VIK1 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
Snrnp25Q8VIK1 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Snrnp25Q8VIK1 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Snrnp25Q8VIK1 Max-202ENSMUST00000110395 1942 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
Snrnp25Q8VIK1 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Snrnp25Q8VIK1 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Snrnp25Q8VIK1 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Snrnp25Q8VIK1 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Snrnp25Q8VIK1 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Snrnp25Q8VIK1 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC16.19■□□□□ 0.18
Snrnp25Q8VIK1 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Snrnp25Q8VIK1 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC16.19■□□□□ 0.18
Snrnp25Q8VIK1 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Snrnp25Q8VIK1 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Snrnp25Q8VIK1 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Snrnp25Q8VIK1 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Snrnp25Q8VIK1 Gm27628-201ENSMUST00000184911 107 ntBASIC16.19■□□□□ 0.18
Snrnp25Q8VIK1 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC16.19■□□□□ 0.18
Snrnp25Q8VIK1 Gm45167-201ENSMUST00000208007 322 ntBASIC16.19■□□□□ 0.18
Snrnp25Q8VIK1 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
Snrnp25Q8VIK1 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Snrnp25Q8VIK1 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Snrnp25Q8VIK1 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
Snrnp25Q8VIK1 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
Snrnp25Q8VIK1 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC16.19■□□□□ 0.18
Snrnp25Q8VIK1 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Snrnp25Q8VIK1 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 28.8 ms