Protein–RNA interactions for Protein: Q8VEE4

Rpa1, Replication protein A 70 kDa DNA-binding subunit, mousemouse

Known RBP Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpa1Q8VEE4 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Rpa1Q8VEE4 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Rpa1Q8VEE4 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Rpa1Q8VEE4 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
Rpa1Q8VEE4 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
Rpa1Q8VEE4 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Rpa1Q8VEE4 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Rpa1Q8VEE4 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Rpa1Q8VEE4 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Rpa1Q8VEE4 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Rpa1Q8VEE4 Cacng2-201ENSMUST00000019290 5510 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Rpa1Q8VEE4 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Rpa1Q8VEE4 Pccb-201ENSMUST00000035116 2320 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Rpa1Q8VEE4 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.1
Rpa1Q8VEE4 Dzip1-201ENSMUST00000004055 4079 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Rpa1Q8VEE4 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Rpa1Q8VEE4 Kctd14-205ENSMUST00000206279 2203 ntAPPRIS ALT2 TSL 2 BASIC15.64■□□□□ 0.09
Rpa1Q8VEE4 2410018L13Rik-205ENSMUST00000149246 3370 ntTSL 2 BASIC15.64■□□□□ 0.09
Rpa1Q8VEE4 Cdkn2aip-202ENSMUST00000212175 3393 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Rpa1Q8VEE4 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Rpa1Q8VEE4 Tns1-222ENSMUST00000212888 5643 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
Rpa1Q8VEE4 Grip2-205ENSMUST00000162300 5206 ntAPPRIS P2 TSL 5 BASIC15.64■□□□□ 0.09
Rpa1Q8VEE4 Ankrd13b-202ENSMUST00000092892 3336 ntAPPRIS P2 TSL 5 BASIC15.64■□□□□ 0.09
Rpa1Q8VEE4 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Rpa1Q8VEE4 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Rpa1Q8VEE4 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Rpa1Q8VEE4 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Rpa1Q8VEE4 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Rpa1Q8VEE4 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Rpa1Q8VEE4 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Rpa1Q8VEE4 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Rpa1Q8VEE4 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC15.64■□□□□ 0.09
Rpa1Q8VEE4 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
Rpa1Q8VEE4 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
Rpa1Q8VEE4 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC15.64■□□□□ 0.09
Rpa1Q8VEE4 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Rpa1Q8VEE4 Ahctf1-201ENSMUST00000027768 8506 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Rpa1Q8VEE4 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Rpa1Q8VEE4 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Rpa1Q8VEE4 Mocos-201ENSMUST00000068006 2884 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Rpa1Q8VEE4 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Rpa1Q8VEE4 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Rpa1Q8VEE4 Agps-201ENSMUST00000047232 7359 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Rpa1Q8VEE4 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Rpa1Q8VEE4 Gm7213-201ENSMUST00000215977 950 ntBASIC15.63■□□□□ 0.09
Rpa1Q8VEE4 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Rpa1Q8VEE4 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC15.63■□□□□ 0.09
Rpa1Q8VEE4 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Rpa1Q8VEE4 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Rpa1Q8VEE4 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
Rpa1Q8VEE4 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Rpa1Q8VEE4 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Rpa1Q8VEE4 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Rpa1Q8VEE4 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Rpa1Q8VEE4 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Rpa1Q8VEE4 Tgfbr2-202ENSMUST00000061101 8092 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Rpa1Q8VEE4 Usp31-201ENSMUST00000046929 10198 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
Rpa1Q8VEE4 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Rpa1Q8VEE4 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Rpa1Q8VEE4 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Rpa1Q8VEE4 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Rpa1Q8VEE4 Zfp503-201ENSMUST00000043409 4216 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Rpa1Q8VEE4 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Rpa1Q8VEE4 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC15.62■□□□□ 0.09
Rpa1Q8VEE4 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Rpa1Q8VEE4 Lrrc41-201ENSMUST00000030471 3065 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Rpa1Q8VEE4 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Rpa1Q8VEE4 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
Rpa1Q8VEE4 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
Rpa1Q8VEE4 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Rpa1Q8VEE4 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Rpa1Q8VEE4 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Rpa1Q8VEE4 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC15.62■□□□□ 0.09
Rpa1Q8VEE4 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Rpa1Q8VEE4 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC15.62■□□□□ 0.09
Rpa1Q8VEE4 Gm29994-201ENSMUST00000195495 1193 ntBASIC15.62■□□□□ 0.09
Rpa1Q8VEE4 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC15.62■□□□□ 0.09
Rpa1Q8VEE4 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Rpa1Q8VEE4 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Rpa1Q8VEE4 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Rpa1Q8VEE4 Dlg5-202ENSMUST00000073687 7784 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Rpa1Q8VEE4 Pcdha1-201ENSMUST00000070797 5248 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Rpa1Q8VEE4 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Rpa1Q8VEE4 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Rpa1Q8VEE4 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Rpa1Q8VEE4 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC15.62■□□□□ 0.09
Rpa1Q8VEE4 Rusc1-202ENSMUST00000090929 3706 ntAPPRIS P4 TSL 1 (best) BASIC15.62■□□□□ 0.09
Rpa1Q8VEE4 Apoa5-201ENSMUST00000034584 2312 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Rpa1Q8VEE4 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Rpa1Q8VEE4 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC15.62■□□□□ 0.09
Rpa1Q8VEE4 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Rpa1Q8VEE4 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
Rpa1Q8VEE4 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Rpa1Q8VEE4 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Rpa1Q8VEE4 Cflar-204ENSMUST00000114309 2010 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Rpa1Q8VEE4 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Rpa1Q8VEE4 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Rpa1Q8VEE4 Adgrl1-210ENSMUST00000152978 5734 ntTSL 5 BASIC15.61■□□□□ 0.09
Rpa1Q8VEE4 Gldn-201ENSMUST00000056740 4658 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Rpa1Q8VEE4 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 37.4 ms