Protein–RNA interactions for Protein: Q8R1J3

Zcchc9, Zinc finger CCHC domain-containing protein 9, mousemouse

Known RBP Predictions only

Length 271 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zcchc9Q8R1J3 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Zcchc9Q8R1J3 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Zcchc9Q8R1J3 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Zcchc9Q8R1J3 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Zcchc9Q8R1J3 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC15.46■□□□□ 0.07
Zcchc9Q8R1J3 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Zcchc9Q8R1J3 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
Zcchc9Q8R1J3 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
Zcchc9Q8R1J3 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC15.46■□□□□ 0.06
Zcchc9Q8R1J3 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.06
Zcchc9Q8R1J3 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC15.46■□□□□ 0.06
Zcchc9Q8R1J3 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Zcchc9Q8R1J3 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Zcchc9Q8R1J3 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Zcchc9Q8R1J3 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC15.45■□□□□ 0.06
Zcchc9Q8R1J3 Gm14221-202ENSMUST00000209603 1437 ntTSL 5 BASIC15.45■□□□□ 0.06
Zcchc9Q8R1J3 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
Zcchc9Q8R1J3 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Zcchc9Q8R1J3 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Zcchc9Q8R1J3 Rhox7b-201ENSMUST00000115156 1091 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Zcchc9Q8R1J3 H2af-ps-201ENSMUST00000119066 295 ntBASIC15.45■□□□□ 0.06
Zcchc9Q8R1J3 Gm10576-201ENSMUST00000191927 825 ntBASIC15.45■□□□□ 0.06
Zcchc9Q8R1J3 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Zcchc9Q8R1J3 AC131709.1-201ENSMUST00000224731 1180 ntBASIC15.45■□□□□ 0.06
Zcchc9Q8R1J3 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Zcchc9Q8R1J3 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Zcchc9Q8R1J3 Rhox7a-201ENSMUST00000096454 983 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Zcchc9Q8R1J3 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
Zcchc9Q8R1J3 Fuz-213ENSMUST00000209039 1453 ntTSL 5 BASIC15.45■□□□□ 0.06
Zcchc9Q8R1J3 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Zcchc9Q8R1J3 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Zcchc9Q8R1J3 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Zcchc9Q8R1J3 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
Zcchc9Q8R1J3 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Zcchc9Q8R1J3 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Zcchc9Q8R1J3 Zkscan3-208ENSMUST00000224820 5398 ntBASIC15.44■□□□□ 0.06
Zcchc9Q8R1J3 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Zcchc9Q8R1J3 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Zcchc9Q8R1J3 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Zcchc9Q8R1J3 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Zcchc9Q8R1J3 Gm8784-201ENSMUST00000222096 1435 ntBASIC15.44■□□□□ 0.06
Zcchc9Q8R1J3 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Zcchc9Q8R1J3 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Zcchc9Q8R1J3 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
Zcchc9Q8R1J3 Podn-203ENSMUST00000106709 3170 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Zcchc9Q8R1J3 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Zcchc9Q8R1J3 Gm13431-203ENSMUST00000147012 388 ntTSL 2 BASIC15.44■□□□□ 0.06
Zcchc9Q8R1J3 Gm20481-201ENSMUST00000173680 564 ntAPPRIS P1 TSL 3 BASIC15.44■□□□□ 0.06
Zcchc9Q8R1J3 Gm45167-201ENSMUST00000208007 322 ntBASIC15.44■□□□□ 0.06
Zcchc9Q8R1J3 Gm7229-201ENSMUST00000214719 1007 ntBASIC15.44■□□□□ 0.06
Zcchc9Q8R1J3 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Zcchc9Q8R1J3 Crxos-201ENSMUST00000098801 934 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Zcchc9Q8R1J3 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Zcchc9Q8R1J3 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Zcchc9Q8R1J3 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC15.44■□□□□ 0.06
Zcchc9Q8R1J3 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Zcchc9Q8R1J3 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
Zcchc9Q8R1J3 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Zcchc9Q8R1J3 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Zcchc9Q8R1J3 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Zcchc9Q8R1J3 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC15.44■□□□□ 0.06
Zcchc9Q8R1J3 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Zcchc9Q8R1J3 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Zcchc9Q8R1J3 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Zcchc9Q8R1J3 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Zcchc9Q8R1J3 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
Zcchc9Q8R1J3 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC15.43■□□□□ 0.06
Zcchc9Q8R1J3 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Zcchc9Q8R1J3 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Zcchc9Q8R1J3 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Zcchc9Q8R1J3 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Zcchc9Q8R1J3 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Zcchc9Q8R1J3 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC15.43■□□□□ 0.06
Zcchc9Q8R1J3 Dpm3-202ENSMUST00000107462 827 ntAPPRIS P1 TSL 3 BASIC15.43■□□□□ 0.06
Zcchc9Q8R1J3 Tmsb4x-201ENSMUST00000112172 768 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Zcchc9Q8R1J3 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC15.43■□□□□ 0.06
Zcchc9Q8R1J3 Gm5253-201ENSMUST00000187104 1025 ntBASIC15.43■□□□□ 0.06
Zcchc9Q8R1J3 Gm37153-201ENSMUST00000193637 231 ntBASIC15.43■□□□□ 0.06
Zcchc9Q8R1J3 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Zcchc9Q8R1J3 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Zcchc9Q8R1J3 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC15.43■□□□□ 0.06
Zcchc9Q8R1J3 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Zcchc9Q8R1J3 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
Zcchc9Q8R1J3 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Zcchc9Q8R1J3 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Zcchc9Q8R1J3 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Zcchc9Q8R1J3 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC15.43■□□□□ 0.06
Zcchc9Q8R1J3 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Zcchc9Q8R1J3 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Zcchc9Q8R1J3 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Zcchc9Q8R1J3 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Zcchc9Q8R1J3 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Zcchc9Q8R1J3 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Zcchc9Q8R1J3 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Zcchc9Q8R1J3 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Zcchc9Q8R1J3 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Zcchc9Q8R1J3 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC15.42■□□□□ 0.06
Zcchc9Q8R1J3 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Zcchc9Q8R1J3 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Zcchc9Q8R1J3 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Retrieved 100 of 76,532 protein–RNA pairs in 44.8 ms