Protein–RNA interactions for Protein: Q8CEG5

Ccdc28b, Coiled-coil domain-containing protein 28B, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28bQ8CEG5 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ccdc28bQ8CEG5 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
Ccdc28bQ8CEG5 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ccdc28bQ8CEG5 5033426O07Rik-202ENSMUST00000212635 2110 ntTSL 5 BASIC15.34■□□□□ 0.05
Ccdc28bQ8CEG5 Appl1-201ENSMUST00000036570 7642 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ccdc28bQ8CEG5 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC15.34■□□□□ 0.05
Ccdc28bQ8CEG5 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ccdc28bQ8CEG5 Gm9889-202ENSMUST00000206983 1577 ntBASIC15.34■□□□□ 0.05
Ccdc28bQ8CEG5 Gm8520-201ENSMUST00000186517 868 ntBASIC15.34■□□□□ 0.05
Ccdc28bQ8CEG5 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC15.34■□□□□ 0.05
Ccdc28bQ8CEG5 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC15.34■□□□□ 0.05
Ccdc28bQ8CEG5 CT025689.6-201ENSMUST00000224991 1104 ntBASIC15.34■□□□□ 0.05
Ccdc28bQ8CEG5 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ccdc28bQ8CEG5 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ccdc28bQ8CEG5 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC15.34■□□□□ 0.05
Ccdc28bQ8CEG5 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ccdc28bQ8CEG5 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC15.34■□□□□ 0.05
Ccdc28bQ8CEG5 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ccdc28bQ8CEG5 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ccdc28bQ8CEG5 Ano7-201ENSMUST00000058682 2963 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ccdc28bQ8CEG5 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ccdc28bQ8CEG5 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC15.34■□□□□ 0.05
Ccdc28bQ8CEG5 AC122901.1-201ENSMUST00000214203 1790 ntBASIC15.34■□□□□ 0.05
Ccdc28bQ8CEG5 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ccdc28bQ8CEG5 Lamc1-201ENSMUST00000027752 7622 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ccdc28bQ8CEG5 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Ccdc28bQ8CEG5 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Ccdc28bQ8CEG5 Rspry1-207ENSMUST00000212729 2800 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Ccdc28bQ8CEG5 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
Ccdc28bQ8CEG5 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
Ccdc28bQ8CEG5 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
Ccdc28bQ8CEG5 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Ccdc28bQ8CEG5 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Ccdc28bQ8CEG5 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
Ccdc28bQ8CEG5 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC15.33■□□□□ 0.04
Ccdc28bQ8CEG5 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
Ccdc28bQ8CEG5 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC15.33■□□□□ 0.04
Ccdc28bQ8CEG5 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC15.33■□□□□ 0.04
Ccdc28bQ8CEG5 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Ccdc28bQ8CEG5 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Ccdc28bQ8CEG5 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
Ccdc28bQ8CEG5 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC15.33■□□□□ 0.04
Ccdc28bQ8CEG5 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Ccdc28bQ8CEG5 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Ccdc28bQ8CEG5 Etl4-207ENSMUST00000114610 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Ccdc28bQ8CEG5 Cntfr-204ENSMUST00000102962 1926 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Ccdc28bQ8CEG5 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Ccdc28bQ8CEG5 Olfr56-201ENSMUST00000056759 1925 ntTSL 5 BASIC15.33■□□□□ 0.04
Ccdc28bQ8CEG5 Cfap45-201ENSMUST00000085894 1908 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Ccdc28bQ8CEG5 Tap2-201ENSMUST00000025197 3442 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Ccdc28bQ8CEG5 Kif17-201ENSMUST00000030539 3453 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
Ccdc28bQ8CEG5 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Ccdc28bQ8CEG5 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
Ccdc28bQ8CEG5 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ccdc28bQ8CEG5 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ccdc28bQ8CEG5 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Ccdc28bQ8CEG5 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ccdc28bQ8CEG5 Moxd1-201ENSMUST00000095784 3090 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ccdc28bQ8CEG5 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Ccdc28bQ8CEG5 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC15.32■□□□□ 0.04
Ccdc28bQ8CEG5 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ccdc28bQ8CEG5 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC15.32■□□□□ 0.04
Ccdc28bQ8CEG5 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC15.32■□□□□ 0.04
Ccdc28bQ8CEG5 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ccdc28bQ8CEG5 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ccdc28bQ8CEG5 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC15.32■□□□□ 0.04
Ccdc28bQ8CEG5 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Ccdc28bQ8CEG5 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ccdc28bQ8CEG5 Tomm34-202ENSMUST00000109384 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ccdc28bQ8CEG5 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Ccdc28bQ8CEG5 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ccdc28bQ8CEG5 Gpr88-201ENSMUST00000090473 3469 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ccdc28bQ8CEG5 Adgrb2-208ENSMUST00000121049 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ccdc28bQ8CEG5 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Ccdc28bQ8CEG5 Cry2-202ENSMUST00000111278 2160 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ccdc28bQ8CEG5 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Ccdc28bQ8CEG5 Anks1-201ENSMUST00000025058 6844 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ccdc28bQ8CEG5 Fubp1-206ENSMUST00000196739 2526 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ccdc28bQ8CEG5 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC15.31■□□□□ 0.04
Ccdc28bQ8CEG5 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ccdc28bQ8CEG5 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ccdc28bQ8CEG5 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC15.31■□□□□ 0.04
Ccdc28bQ8CEG5 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ccdc28bQ8CEG5 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ccdc28bQ8CEG5 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ccdc28bQ8CEG5 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ccdc28bQ8CEG5 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ccdc28bQ8CEG5 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC15.31■□□□□ 0.04
Ccdc28bQ8CEG5 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ccdc28bQ8CEG5 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Ccdc28bQ8CEG5 Gpd1l-204ENSMUST00000146623 4391 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ccdc28bQ8CEG5 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Ccdc28bQ8CEG5 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Ccdc28bQ8CEG5 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ccdc28bQ8CEG5 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Ccdc28bQ8CEG5 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Ccdc28bQ8CEG5 Kctd20-202ENSMUST00000117672 2219 ntTSL 5 BASIC15.31■□□□□ 0.04
Ccdc28bQ8CEG5 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ccdc28bQ8CEG5 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC15.3■□□□□ 0.04
Ccdc28bQ8CEG5 Csgalnact2-201ENSMUST00000049344 3661 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 28.3 ms