Protein–RNA interactions for Protein: Q8C7M3

Trim9, E3 ubiquitin-protein ligase TRIM9, mousemouse

Predictions only

Length 817 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim9Q8C7M3 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC17.09■□□□□ 0.33
Trim9Q8C7M3 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC17.09■□□□□ 0.33
Trim9Q8C7M3 AC159106.1-201ENSMUST00000224421 690 ntBASIC17.09■□□□□ 0.33
Trim9Q8C7M3 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
Trim9Q8C7M3 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trim9Q8C7M3 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
Trim9Q8C7M3 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trim9Q8C7M3 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trim9Q8C7M3 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trim9Q8C7M3 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trim9Q8C7M3 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Trim9Q8C7M3 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
Trim9Q8C7M3 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Trim9Q8C7M3 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC17.08■□□□□ 0.33
Trim9Q8C7M3 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Trim9Q8C7M3 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Trim9Q8C7M3 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.33
Trim9Q8C7M3 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC17.08■□□□□ 0.32
Trim9Q8C7M3 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
Trim9Q8C7M3 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC17.08■□□□□ 0.32
Trim9Q8C7M3 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC17.08■□□□□ 0.32
Trim9Q8C7M3 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Trim9Q8C7M3 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC17.08■□□□□ 0.32
Trim9Q8C7M3 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC17.08■□□□□ 0.32
Trim9Q8C7M3 Umpk-ps-201ENSMUST00000211897 827 ntBASIC17.08■□□□□ 0.32
Trim9Q8C7M3 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC17.08■□□□□ 0.32
Trim9Q8C7M3 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC17.08■□□□□ 0.32
Trim9Q8C7M3 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Trim9Q8C7M3 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Trim9Q8C7M3 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Trim9Q8C7M3 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
Trim9Q8C7M3 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Trim9Q8C7M3 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
Trim9Q8C7M3 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
Trim9Q8C7M3 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
Trim9Q8C7M3 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC17.08■□□□□ 0.32
Trim9Q8C7M3 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC17.08■□□□□ 0.32
Trim9Q8C7M3 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trim9Q8C7M3 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Trim9Q8C7M3 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trim9Q8C7M3 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trim9Q8C7M3 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trim9Q8C7M3 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trim9Q8C7M3 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
Trim9Q8C7M3 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC17.07■□□□□ 0.32
Trim9Q8C7M3 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Trim9Q8C7M3 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Trim9Q8C7M3 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trim9Q8C7M3 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
Trim9Q8C7M3 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Trim9Q8C7M3 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trim9Q8C7M3 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Trim9Q8C7M3 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trim9Q8C7M3 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trim9Q8C7M3 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trim9Q8C7M3 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trim9Q8C7M3 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC17.07■□□□□ 0.32
Trim9Q8C7M3 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Trim9Q8C7M3 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
Trim9Q8C7M3 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trim9Q8C7M3 AC154412.1-201ENSMUST00000226540 2786 ntBASIC17.06■□□□□ 0.32
Trim9Q8C7M3 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Trim9Q8C7M3 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trim9Q8C7M3 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
Trim9Q8C7M3 Steap2-202ENSMUST00000115424 3285 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trim9Q8C7M3 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trim9Q8C7M3 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trim9Q8C7M3 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
Trim9Q8C7M3 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trim9Q8C7M3 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC17.06■□□□□ 0.32
Trim9Q8C7M3 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trim9Q8C7M3 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC17.06■□□□□ 0.32
Trim9Q8C7M3 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trim9Q8C7M3 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trim9Q8C7M3 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Trim9Q8C7M3 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC17.06■□□□□ 0.32
Trim9Q8C7M3 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trim9Q8C7M3 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Trim9Q8C7M3 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Trim9Q8C7M3 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Trim9Q8C7M3 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Trim9Q8C7M3 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
Trim9Q8C7M3 Enah-204ENSMUST00000111030 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trim9Q8C7M3 Enah-212ENSMUST00000195059 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trim9Q8C7M3 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trim9Q8C7M3 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trim9Q8C7M3 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Trim9Q8C7M3 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC17.05■□□□□ 0.32
Trim9Q8C7M3 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Trim9Q8C7M3 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trim9Q8C7M3 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trim9Q8C7M3 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trim9Q8C7M3 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trim9Q8C7M3 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trim9Q8C7M3 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trim9Q8C7M3 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC17.05■□□□□ 0.32
Trim9Q8C7M3 Zkscan3-208ENSMUST00000224820 5398 ntBASIC17.05■□□□□ 0.32
Trim9Q8C7M3 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trim9Q8C7M3 Gm25990-201ENSMUST00000102440 86 ntBASIC17.05■□□□□ 0.32
Trim9Q8C7M3 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 29.4 ms