Protein–RNA interactions for Protein: Q8C6K9

Col6a6, Collagen alpha-6(VI) chain, mousemouse

Predictions only

Length 2,265 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a6Q8C6K9 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Col6a6Q8C6K9 Psrc1-201ENSMUST00000090561 1686 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Col6a6Q8C6K9 Prtg-201ENSMUST00000055535 9148 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Col6a6Q8C6K9 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC13.96□□□□□ -0.17
Col6a6Q8C6K9 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.18
Col6a6Q8C6K9 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Col6a6Q8C6K9 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
Col6a6Q8C6K9 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
Col6a6Q8C6K9 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Col6a6Q8C6K9 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Col6a6Q8C6K9 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC13.96□□□□□ -0.18
Col6a6Q8C6K9 Haghl-203ENSMUST00000133071 1128 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Col6a6Q8C6K9 Pfdn6-204ENSMUST00000174048 560 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
Col6a6Q8C6K9 Lamtor1-202ENSMUST00000193465 661 ntTSL 5 BASIC13.95□□□□□ -0.18
Col6a6Q8C6K9 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC13.95□□□□□ -0.18
Col6a6Q8C6K9 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Col6a6Q8C6K9 Mok-202ENSMUST00000070565 1693 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Col6a6Q8C6K9 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Col6a6Q8C6K9 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC13.95□□□□□ -0.18
Col6a6Q8C6K9 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
Col6a6Q8C6K9 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Col6a6Q8C6K9 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
Col6a6Q8C6K9 Ldoc1-201ENSMUST00000075983 1459 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
Col6a6Q8C6K9 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC13.95□□□□□ -0.18
Col6a6Q8C6K9 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
Col6a6Q8C6K9 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Col6a6Q8C6K9 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
Col6a6Q8C6K9 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Col6a6Q8C6K9 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Col6a6Q8C6K9 Park7-204ENSMUST00000105675 882 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
Col6a6Q8C6K9 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Col6a6Q8C6K9 Gm6973-201ENSMUST00000117080 721 ntBASIC13.95□□□□□ -0.18
Col6a6Q8C6K9 Gm27437-201ENSMUST00000183429 107 ntBASIC13.95□□□□□ -0.18
Col6a6Q8C6K9 Gm43182-201ENSMUST00000199476 2528 ntBASIC13.95□□□□□ -0.18
Col6a6Q8C6K9 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Col6a6Q8C6K9 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Col6a6Q8C6K9 Gm10044-204ENSMUST00000170177 659 ntTSL 3 BASIC13.94□□□□□ -0.18
Col6a6Q8C6K9 Irs3-202ENSMUST00000196511 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Col6a6Q8C6K9 AC127302.2-201ENSMUST00000215212 268 ntBASIC13.94□□□□□ -0.18
Col6a6Q8C6K9 AC166341.4-201ENSMUST00000220625 123 ntBASIC13.94□□□□□ -0.18
Col6a6Q8C6K9 Haglr-201ENSMUST00000100000 2085 ntBASIC13.94□□□□□ -0.18
Col6a6Q8C6K9 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Col6a6Q8C6K9 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC13.94□□□□□ -0.18
Col6a6Q8C6K9 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Col6a6Q8C6K9 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Col6a6Q8C6K9 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Col6a6Q8C6K9 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
Col6a6Q8C6K9 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Col6a6Q8C6K9 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Col6a6Q8C6K9 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Col6a6Q8C6K9 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC13.94□□□□□ -0.18
Col6a6Q8C6K9 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Col6a6Q8C6K9 Krtap1-3-201ENSMUST00000104930 879 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
Col6a6Q8C6K9 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC13.94□□□□□ -0.18
Col6a6Q8C6K9 1700028E10Rik-205ENSMUST00000202024 924 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Col6a6Q8C6K9 AC122024.2-201ENSMUST00000220086 871 ntBASIC13.94□□□□□ -0.18
Col6a6Q8C6K9 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Col6a6Q8C6K9 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Col6a6Q8C6K9 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Col6a6Q8C6K9 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Col6a6Q8C6K9 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Col6a6Q8C6K9 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Col6a6Q8C6K9 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
Col6a6Q8C6K9 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Col6a6Q8C6K9 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Col6a6Q8C6K9 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Col6a6Q8C6K9 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Col6a6Q8C6K9 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Col6a6Q8C6K9 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
Col6a6Q8C6K9 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Col6a6Q8C6K9 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
Col6a6Q8C6K9 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Col6a6Q8C6K9 Dnajc8-205ENSMUST00000105939 746 ntTSL 5 BASIC13.93□□□□□ -0.18
Col6a6Q8C6K9 Mvk-206ENSMUST00000137167 1049 ntTSL 2 BASIC13.93□□□□□ -0.18
Col6a6Q8C6K9 Umad1-206ENSMUST00000160705 624 ntAPPRIS P4 TSL 2 BASIC13.93□□□□□ -0.18
Col6a6Q8C6K9 Panct2-202ENSMUST00000188631 625 ntTSL 3 BASIC13.93□□□□□ -0.18
Col6a6Q8C6K9 Gm2272-201ENSMUST00000194903 582 ntBASIC13.93□□□□□ -0.18
Col6a6Q8C6K9 4930408O17Rik-202ENSMUST00000222624 1131 ntTSL 5 BASIC13.93□□□□□ -0.18
Col6a6Q8C6K9 Gm33785-201ENSMUST00000222961 886 ntTSL 5 BASIC13.93□□□□□ -0.18
Col6a6Q8C6K9 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
Col6a6Q8C6K9 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
Col6a6Q8C6K9 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Col6a6Q8C6K9 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
Col6a6Q8C6K9 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
Col6a6Q8C6K9 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
Col6a6Q8C6K9 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
Col6a6Q8C6K9 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Col6a6Q8C6K9 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Col6a6Q8C6K9 Coq6-203ENSMUST00000110278 1354 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
Col6a6Q8C6K9 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Col6a6Q8C6K9 Il15ra-206ENSMUST00000114834 784 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Col6a6Q8C6K9 Dusp13-203ENSMUST00000120956 1070 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Col6a6Q8C6K9 Dph3-205ENSMUST00000124303 809 ntTSL 2 BASIC13.93□□□□□ -0.18
Col6a6Q8C6K9 Gm20412-201ENSMUST00000173249 633 ntTSL 5 BASIC13.93□□□□□ -0.18
Col6a6Q8C6K9 S100a13-201ENSMUST00000048138 715 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Col6a6Q8C6K9 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC13.93□□□□□ -0.18
Col6a6Q8C6K9 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Col6a6Q8C6K9 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Col6a6Q8C6K9 Eif2b2-201ENSMUST00000004910 1605 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Col6a6Q8C6K9 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 29.3 ms