Protein–RNA interactions for Protein: Q8BL00

Cdhr3, Cadherin-related family member 3, mousemouse

Predictions only

Length 831 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdhr3Q8BL00 Apoa5-201ENSMUST00000034584 2312 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cdhr3Q8BL00 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Cdhr3Q8BL00 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cdhr3Q8BL00 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cdhr3Q8BL00 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cdhr3Q8BL00 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cdhr3Q8BL00 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cdhr3Q8BL00 Gm44443-201ENSMUST00000204396 5633 ntBASIC13.53□□□□□ -0.24
Cdhr3Q8BL00 Ano10-201ENSMUST00000042546 2653 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cdhr3Q8BL00 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Cdhr3Q8BL00 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Cdhr3Q8BL00 Washc1-201ENSMUST00000072383 2904 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cdhr3Q8BL00 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC13.53□□□□□ -0.24
Cdhr3Q8BL00 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Cdhr3Q8BL00 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Cdhr3Q8BL00 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC13.53□□□□□ -0.24
Cdhr3Q8BL00 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
Cdhr3Q8BL00 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
Cdhr3Q8BL00 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Cdhr3Q8BL00 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC13.53□□□□□ -0.24
Cdhr3Q8BL00 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cdhr3Q8BL00 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cdhr3Q8BL00 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cdhr3Q8BL00 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cdhr3Q8BL00 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cdhr3Q8BL00 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC13.53□□□□□ -0.24
Cdhr3Q8BL00 Agbl5-213ENSMUST00000201917 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Cdhr3Q8BL00 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC13.52□□□□□ -0.24
Cdhr3Q8BL00 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Cdhr3Q8BL00 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Cdhr3Q8BL00 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Cdhr3Q8BL00 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC13.52□□□□□ -0.25
Cdhr3Q8BL00 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Cdhr3Q8BL00 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Cdhr3Q8BL00 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Cdhr3Q8BL00 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
Cdhr3Q8BL00 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.25
Cdhr3Q8BL00 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC13.52□□□□□ -0.25
Cdhr3Q8BL00 Gm10252-201ENSMUST00000209541 832 ntBASIC13.52□□□□□ -0.25
Cdhr3Q8BL00 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
Cdhr3Q8BL00 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC13.52□□□□□ -0.25
Cdhr3Q8BL00 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC13.52□□□□□ -0.25
Cdhr3Q8BL00 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Cdhr3Q8BL00 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Cdhr3Q8BL00 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Cdhr3Q8BL00 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC13.52□□□□□ -0.25
Cdhr3Q8BL00 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Cdhr3Q8BL00 Gm13337-201ENSMUST00000119183 1594 ntBASIC13.52□□□□□ -0.25
Cdhr3Q8BL00 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Cdhr3Q8BL00 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC13.52□□□□□ -0.25
Cdhr3Q8BL00 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Cdhr3Q8BL00 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Cdhr3Q8BL00 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Cdhr3Q8BL00 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Cdhr3Q8BL00 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Cdhr3Q8BL00 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Cdhr3Q8BL00 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
Cdhr3Q8BL00 Adgrd2-ps-201ENSMUST00000118797 2662 ntBASIC13.52□□□□□ -0.25
Cdhr3Q8BL00 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
Cdhr3Q8BL00 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
Cdhr3Q8BL00 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Cdhr3Q8BL00 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
Cdhr3Q8BL00 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Cdhr3Q8BL00 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Cdhr3Q8BL00 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Cdhr3Q8BL00 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Cdhr3Q8BL00 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
Cdhr3Q8BL00 Zmym3-201ENSMUST00000063577 6057 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Cdhr3Q8BL00 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Cdhr3Q8BL00 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Cdhr3Q8BL00 Otud4-202ENSMUST00000173078 7354 ntAPPRIS P4 TSL 1 (best) BASIC13.51□□□□□ -0.25
Cdhr3Q8BL00 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
Cdhr3Q8BL00 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Cdhr3Q8BL00 Gm11950-201ENSMUST00000121615 838 ntBASIC13.51□□□□□ -0.25
Cdhr3Q8BL00 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC13.51□□□□□ -0.25
Cdhr3Q8BL00 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC13.51□□□□□ -0.25
Cdhr3Q8BL00 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC13.51□□□□□ -0.25
Cdhr3Q8BL00 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Cdhr3Q8BL00 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC13.51□□□□□ -0.25
Cdhr3Q8BL00 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Cdhr3Q8BL00 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
Cdhr3Q8BL00 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Cdhr3Q8BL00 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Cdhr3Q8BL00 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Cdhr3Q8BL00 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Cdhr3Q8BL00 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Cdhr3Q8BL00 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Cdhr3Q8BL00 Cadm2-203ENSMUST00000120898 2768 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Cdhr3Q8BL00 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Cdhr3Q8BL00 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Cdhr3Q8BL00 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Cdhr3Q8BL00 Gm37728-201ENSMUST00000195025 2292 ntBASIC13.51□□□□□ -0.25
Cdhr3Q8BL00 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Cdhr3Q8BL00 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Cdhr3Q8BL00 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Cdhr3Q8BL00 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Cdhr3Q8BL00 Ubn1-201ENSMUST00000052449 6455 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Cdhr3Q8BL00 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC13.5□□□□□ -0.25
Cdhr3Q8BL00 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Cdhr3Q8BL00 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 26.6 ms