Protein–RNA interactions for Protein: Q8BHK2

Scn3b, Sodium channel subunit beta-3, mousemouse

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn3bQ8BHK2 Ttc3-201ENSMUST00000117648 7417 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Scn3bQ8BHK2 Gopc-201ENSMUST00000020008 4216 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Scn3bQ8BHK2 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Scn3bQ8BHK2 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC14.43□□□□□ -0.1
Scn3bQ8BHK2 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Scn3bQ8BHK2 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Scn3bQ8BHK2 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC14.43□□□□□ -0.1
Scn3bQ8BHK2 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC14.43□□□□□ -0.1
Scn3bQ8BHK2 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Scn3bQ8BHK2 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Scn3bQ8BHK2 Hic2-201ENSMUST00000090190 6354 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Scn3bQ8BHK2 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
Scn3bQ8BHK2 Nek7-202ENSMUST00000186017 5258 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Scn3bQ8BHK2 Rps6ka5-209ENSMUST00000222731 5642 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Scn3bQ8BHK2 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Scn3bQ8BHK2 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Scn3bQ8BHK2 F2-201ENSMUST00000028681 1988 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Scn3bQ8BHK2 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Scn3bQ8BHK2 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Scn3bQ8BHK2 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Scn3bQ8BHK2 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Scn3bQ8BHK2 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Scn3bQ8BHK2 Phka1-201ENSMUST00000043596 5938 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Scn3bQ8BHK2 Galnt17-201ENSMUST00000086023 8040 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Scn3bQ8BHK2 Cybrd1-201ENSMUST00000028403 5339 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Scn3bQ8BHK2 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Scn3bQ8BHK2 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Scn3bQ8BHK2 Dbn1-203ENSMUST00000109923 2940 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Scn3bQ8BHK2 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC14.42□□□□□ -0.1
Scn3bQ8BHK2 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC14.42□□□□□ -0.1
Scn3bQ8BHK2 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Scn3bQ8BHK2 Mapk9-210ENSMUST00000178543 4677 ntAPPRIS ALT1 TSL 5 BASIC14.42□□□□□ -0.1
Scn3bQ8BHK2 Foxj3-201ENSMUST00000044564 4789 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Scn3bQ8BHK2 Vwa5b2-203ENSMUST00000100074 2512 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Scn3bQ8BHK2 Pcdh10-201ENSMUST00000166126 7081 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Scn3bQ8BHK2 Gm12527-201ENSMUST00000117967 564 ntBASIC14.42□□□□□ -0.1
Scn3bQ8BHK2 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Scn3bQ8BHK2 Gm6257-201ENSMUST00000163864 910 ntBASIC14.42□□□□□ -0.1
Scn3bQ8BHK2 Gm4217-201ENSMUST00000182243 1002 ntBASIC14.42□□□□□ -0.1
Scn3bQ8BHK2 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Scn3bQ8BHK2 Pcdha11-201ENSMUST00000115658 5359 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Scn3bQ8BHK2 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Scn3bQ8BHK2 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Scn3bQ8BHK2 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Scn3bQ8BHK2 Tbc1d22b-201ENSMUST00000048677 3592 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Scn3bQ8BHK2 Anxa4-201ENSMUST00000001187 2002 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Scn3bQ8BHK2 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC14.42□□□□□ -0.1
Scn3bQ8BHK2 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC14.42□□□□□ -0.1
Scn3bQ8BHK2 Col1a1-201ENSMUST00000001547 5930 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Scn3bQ8BHK2 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Scn3bQ8BHK2 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC14.42□□□□□ -0.1
Scn3bQ8BHK2 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Scn3bQ8BHK2 Lipo3-202ENSMUST00000112508 2839 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Scn3bQ8BHK2 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Scn3bQ8BHK2 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Scn3bQ8BHK2 Bag6-202ENSMUST00000166426 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Scn3bQ8BHK2 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Scn3bQ8BHK2 Aspm-205ENSMUST00000200083 6072 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Scn3bQ8BHK2 Tbx3-201ENSMUST00000018748 4856 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Scn3bQ8BHK2 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Scn3bQ8BHK2 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Scn3bQ8BHK2 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Scn3bQ8BHK2 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Scn3bQ8BHK2 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Scn3bQ8BHK2 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Scn3bQ8BHK2 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Scn3bQ8BHK2 Ppp2r1a-201ENSMUST00000007708 2410 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Scn3bQ8BHK2 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Scn3bQ8BHK2 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Scn3bQ8BHK2 Gm13474-201ENSMUST00000122466 815 ntBASIC14.41□□□□□ -0.1
Scn3bQ8BHK2 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC14.41□□□□□ -0.1
Scn3bQ8BHK2 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC14.41□□□□□ -0.1
Scn3bQ8BHK2 Gm7370-201ENSMUST00000219471 767 ntBASIC14.41□□□□□ -0.1
Scn3bQ8BHK2 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC14.41□□□□□ -0.1
Scn3bQ8BHK2 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Scn3bQ8BHK2 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC14.41□□□□□ -0.1
Scn3bQ8BHK2 Epha2-201ENSMUST00000006614 3913 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Scn3bQ8BHK2 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Scn3bQ8BHK2 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Scn3bQ8BHK2 Mtss1-201ENSMUST00000080371 4938 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Scn3bQ8BHK2 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Scn3bQ8BHK2 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Scn3bQ8BHK2 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Scn3bQ8BHK2 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Scn3bQ8BHK2 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Scn3bQ8BHK2 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Scn3bQ8BHK2 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Scn3bQ8BHK2 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Scn3bQ8BHK2 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Scn3bQ8BHK2 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC14.4□□□□□ -0.1
Scn3bQ8BHK2 Creg2-201ENSMUST00000053355 6091 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Scn3bQ8BHK2 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Scn3bQ8BHK2 Pou2f2-209ENSMUST00000175774 7047 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Scn3bQ8BHK2 Cacna2d1-205ENSMUST00000167946 7436 ntAPPRIS ALT1 TSL 5 BASIC14.4□□□□□ -0.1
Scn3bQ8BHK2 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Scn3bQ8BHK2 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Scn3bQ8BHK2 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Scn3bQ8BHK2 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Scn3bQ8BHK2 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Scn3bQ8BHK2 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 20.9 ms