Protein–RNA interactions for Protein: Q80WV7

Srrm3, Serine/arginine repetitive matrix protein 3, mousemouse

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Srrm3Q80WV7 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Srrm3Q80WV7 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Srrm3Q80WV7 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Srrm3Q80WV7 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC16.16■□□□□ 0.18
Srrm3Q80WV7 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Srrm3Q80WV7 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Srrm3Q80WV7 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Srrm3Q80WV7 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Srrm3Q80WV7 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Srrm3Q80WV7 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC16.15■□□□□ 0.18
Srrm3Q80WV7 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Srrm3Q80WV7 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC16.15■□□□□ 0.18
Srrm3Q80WV7 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Srrm3Q80WV7 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Srrm3Q80WV7 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Srrm3Q80WV7 Prss45-202ENSMUST00000146794 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Srrm3Q80WV7 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Srrm3Q80WV7 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
Srrm3Q80WV7 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Srrm3Q80WV7 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Srrm3Q80WV7 Gm5864-201ENSMUST00000202263 970 ntBASIC16.15■□□□□ 0.18
Srrm3Q80WV7 Gm34391-201ENSMUST00000203706 907 ntBASIC16.15■□□□□ 0.18
Srrm3Q80WV7 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
Srrm3Q80WV7 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Srrm3Q80WV7 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC16.15■□□□□ 0.18
Srrm3Q80WV7 Otx2os1-206ENSMUST00000228153 787 ntBASIC16.15■□□□□ 0.18
Srrm3Q80WV7 Apoa5-201ENSMUST00000034584 2312 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Srrm3Q80WV7 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Srrm3Q80WV7 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
Srrm3Q80WV7 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
Srrm3Q80WV7 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Srrm3Q80WV7 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC16.15■□□□□ 0.18
Srrm3Q80WV7 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
Srrm3Q80WV7 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Srrm3Q80WV7 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Srrm3Q80WV7 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Srrm3Q80WV7 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Srrm3Q80WV7 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
Srrm3Q80WV7 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC16.14■□□□□ 0.18
Srrm3Q80WV7 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.18
Srrm3Q80WV7 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
Srrm3Q80WV7 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Srrm3Q80WV7 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC16.14■□□□□ 0.17
Srrm3Q80WV7 Dmtn-201ENSMUST00000022694 5418 ntAPPRIS ALT1 TSL 5 BASIC16.14■□□□□ 0.17
Srrm3Q80WV7 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Srrm3Q80WV7 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Srrm3Q80WV7 Fbxl12-205ENSMUST00000140702 1555 ntBASIC16.14■□□□□ 0.17
Srrm3Q80WV7 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Srrm3Q80WV7 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Srrm3Q80WV7 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
Srrm3Q80WV7 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Srrm3Q80WV7 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Srrm3Q80WV7 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC16.14■□□□□ 0.17
Srrm3Q80WV7 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Srrm3Q80WV7 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC16.14■□□□□ 0.17
Srrm3Q80WV7 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Srrm3Q80WV7 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC16.14■□□□□ 0.17
Srrm3Q80WV7 Gm4217-201ENSMUST00000182243 1002 ntBASIC16.14■□□□□ 0.17
Srrm3Q80WV7 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Srrm3Q80WV7 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Srrm3Q80WV7 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Srrm3Q80WV7 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
Srrm3Q80WV7 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Srrm3Q80WV7 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Srrm3Q80WV7 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Srrm3Q80WV7 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC16.14■□□□□ 0.17
Srrm3Q80WV7 Cflar-204ENSMUST00000114309 2010 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Srrm3Q80WV7 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Srrm3Q80WV7 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Srrm3Q80WV7 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Srrm3Q80WV7 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Srrm3Q80WV7 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Srrm3Q80WV7 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Srrm3Q80WV7 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Srrm3Q80WV7 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
Srrm3Q80WV7 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Srrm3Q80WV7 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Srrm3Q80WV7 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
Srrm3Q80WV7 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Srrm3Q80WV7 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Srrm3Q80WV7 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC16.13■□□□□ 0.17
Srrm3Q80WV7 Mir8098-201ENSMUST00000184011 137 ntBASIC16.13■□□□□ 0.17
Srrm3Q80WV7 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC16.13■□□□□ 0.17
Srrm3Q80WV7 Olfr572-203ENSMUST00000215782 1233 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
Srrm3Q80WV7 Stard3nl-209ENSMUST00000221380 1268 ntTSL 5 BASIC16.13■□□□□ 0.17
Srrm3Q80WV7 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Srrm3Q80WV7 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Srrm3Q80WV7 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Srrm3Q80WV7 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Srrm3Q80WV7 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Srrm3Q80WV7 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC16.13■□□□□ 0.17
Srrm3Q80WV7 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
Srrm3Q80WV7 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC16.13■□□□□ 0.17
Srrm3Q80WV7 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC16.13■□□□□ 0.17
Srrm3Q80WV7 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Srrm3Q80WV7 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Srrm3Q80WV7 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
Srrm3Q80WV7 Gm8784-201ENSMUST00000222096 1435 ntBASIC16.12■□□□□ 0.17
Srrm3Q80WV7 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Srrm3Q80WV7 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 32.5 ms