Protein–RNA interactions for Protein: Q80W14

Prpf40b, Pre-mRNA-processing factor 40 homolog B, mousemouse

Predictions only

Length 870 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf40bQ80W14 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC17.84■□□□□ 0.45
Prpf40bQ80W14 1600014C10Rik-207ENSMUST00000179503 784 ntTSL 5 BASIC17.84■□□□□ 0.45
Prpf40bQ80W14 Cebpzos-202ENSMUST00000180077 602 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Prpf40bQ80W14 Gm27300-201ENSMUST00000184085 97 ntBASIC17.84■□□□□ 0.45
Prpf40bQ80W14 Gm27335-201ENSMUST00000184758 97 ntBASIC17.84■□□□□ 0.45
Prpf40bQ80W14 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC17.84■□□□□ 0.45
Prpf40bQ80W14 Gm45167-201ENSMUST00000208007 322 ntBASIC17.84■□□□□ 0.45
Prpf40bQ80W14 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC17.84■□□□□ 0.45
Prpf40bQ80W14 AC159295.1-201ENSMUST00000225326 940 ntBASIC17.84■□□□□ 0.45
Prpf40bQ80W14 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Prpf40bQ80W14 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC17.84■□□□□ 0.45
Prpf40bQ80W14 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Prpf40bQ80W14 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Prpf40bQ80W14 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC17.84■□□□□ 0.45
Prpf40bQ80W14 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Prpf40bQ80W14 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
Prpf40bQ80W14 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Prpf40bQ80W14 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Prpf40bQ80W14 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC17.84■□□□□ 0.45
Prpf40bQ80W14 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
Prpf40bQ80W14 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC17.83■□□□□ 0.45
Prpf40bQ80W14 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Prpf40bQ80W14 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Prpf40bQ80W14 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Prpf40bQ80W14 Eef1akmt4-201ENSMUST00000115522 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Prpf40bQ80W14 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Prpf40bQ80W14 Gm11508-201ENSMUST00000129337 440 ntTSL 2 BASIC17.83■□□□□ 0.44
Prpf40bQ80W14 Nespas-202ENSMUST00000150276 1262 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Prpf40bQ80W14 Zdhhc23-202ENSMUST00000165648 1278 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Prpf40bQ80W14 Gm44492-201ENSMUST00000197012 141 ntBASIC17.83■□□□□ 0.44
Prpf40bQ80W14 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Prpf40bQ80W14 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
Prpf40bQ80W14 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Prpf40bQ80W14 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
Prpf40bQ80W14 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Prpf40bQ80W14 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Prpf40bQ80W14 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Prpf40bQ80W14 Gm16011-201ENSMUST00000121567 2662 ntBASIC17.83■□□□□ 0.44
Prpf40bQ80W14 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Prpf40bQ80W14 Gtf2e2-201ENSMUST00000167264 1566 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Prpf40bQ80W14 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Prpf40bQ80W14 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC17.82■□□□□ 0.44
Prpf40bQ80W14 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Prpf40bQ80W14 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC17.82■□□□□ 0.44
Prpf40bQ80W14 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Prpf40bQ80W14 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC17.82■□□□□ 0.44
Prpf40bQ80W14 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Prpf40bQ80W14 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
Prpf40bQ80W14 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Prpf40bQ80W14 Slc35b2-202ENSMUST00000223987 1766 ntBASIC17.82■□□□□ 0.44
Prpf40bQ80W14 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
Prpf40bQ80W14 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
Prpf40bQ80W14 Ppcs-202ENSMUST00000106316 954 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Prpf40bQ80W14 Chchd7-208ENSMUST00000121651 620 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Prpf40bQ80W14 Mir1895-201ENSMUST00000122615 79 ntBASIC17.82■□□□□ 0.44
Prpf40bQ80W14 Chchd7-201ENSMUST00000041122 672 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Prpf40bQ80W14 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Prpf40bQ80W14 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
Prpf40bQ80W14 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Prpf40bQ80W14 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Prpf40bQ80W14 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Prpf40bQ80W14 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC17.82■□□□□ 0.44
Prpf40bQ80W14 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Prpf40bQ80W14 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Prpf40bQ80W14 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Prpf40bQ80W14 3110082I17Rik-201ENSMUST00000066052 1429 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Prpf40bQ80W14 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC17.81■□□□□ 0.44
Prpf40bQ80W14 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC17.81■□□□□ 0.44
Prpf40bQ80W14 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Prpf40bQ80W14 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
Prpf40bQ80W14 Rhox2d-201ENSMUST00000115179 685 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
Prpf40bQ80W14 Tspan5-203ENSMUST00000121826 1114 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Prpf40bQ80W14 Xrcc2-204ENSMUST00000134972 464 ntTSL 3 BASIC17.81■□□□□ 0.44
Prpf40bQ80W14 Gm27494-201ENSMUST00000184735 189 ntBASIC17.81■□□□□ 0.44
Prpf40bQ80W14 4930448I06Rik-201ENSMUST00000194002 546 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Prpf40bQ80W14 Hmgb3-201ENSMUST00000015361 1544 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Prpf40bQ80W14 G3bp2-202ENSMUST00000164378 3026 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
Prpf40bQ80W14 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Prpf40bQ80W14 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC17.81■□□□□ 0.44
Prpf40bQ80W14 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Prpf40bQ80W14 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Prpf40bQ80W14 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
Prpf40bQ80W14 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Prpf40bQ80W14 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC17.8■□□□□ 0.44
Prpf40bQ80W14 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
Prpf40bQ80W14 Nxnl2-201ENSMUST00000021828 1167 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Prpf40bQ80W14 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
Prpf40bQ80W14 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Prpf40bQ80W14 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Prpf40bQ80W14 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
Prpf40bQ80W14 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Prpf40bQ80W14 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Prpf40bQ80W14 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Prpf40bQ80W14 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Prpf40bQ80W14 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Prpf40bQ80W14 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Prpf40bQ80W14 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Prpf40bQ80W14 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
Prpf40bQ80W14 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC17.8■□□□□ 0.44
Prpf40bQ80W14 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 29.4 ms