Protein–RNA interactions for Protein: Q80TF3

Pcdh19, Protocadherin-19, mousemouse

Predictions only

Length 1,145 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh19Q80TF3 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
Pcdh19Q80TF3 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Pcdh19Q80TF3 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Pcdh19Q80TF3 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Pcdh19Q80TF3 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Pcdh19Q80TF3 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Pcdh19Q80TF3 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Pcdh19Q80TF3 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Pcdh19Q80TF3 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC15.2■□□□□ 0.02
Pcdh19Q80TF3 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Pcdh19Q80TF3 Lurap1-201ENSMUST00000030469 5742 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Pcdh19Q80TF3 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Pcdh19Q80TF3 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Pcdh19Q80TF3 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Pcdh19Q80TF3 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Pcdh19Q80TF3 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Pcdh19Q80TF3 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
Pcdh19Q80TF3 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Pcdh19Q80TF3 Tead1-201ENSMUST00000059768 9964 ntAPPRIS P4 TSL 1 (best) BASIC15.19■□□□□ 0.02
Pcdh19Q80TF3 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Pcdh19Q80TF3 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Pcdh19Q80TF3 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC15.19■□□□□ 0.02
Pcdh19Q80TF3 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Pcdh19Q80TF3 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Pcdh19Q80TF3 Mir8117-201ENSMUST00000184773 107 ntBASIC15.19■□□□□ 0.02
Pcdh19Q80TF3 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC15.19■□□□□ 0.02
Pcdh19Q80TF3 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC15.19■□□□□ 0.02
Pcdh19Q80TF3 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC15.19■□□□□ 0.02
Pcdh19Q80TF3 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Pcdh19Q80TF3 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC15.19■□□□□ 0.02
Pcdh19Q80TF3 AC174742.1-201ENSMUST00000218272 304 ntBASIC15.19■□□□□ 0.02
Pcdh19Q80TF3 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Pcdh19Q80TF3 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC15.19■□□□□ 0.02
Pcdh19Q80TF3 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC15.19■□□□□ 0.02
Pcdh19Q80TF3 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Pcdh19Q80TF3 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Pcdh19Q80TF3 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Pcdh19Q80TF3 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Pcdh19Q80TF3 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Pcdh19Q80TF3 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdh19Q80TF3 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC15.18■□□□□ 0.02
Pcdh19Q80TF3 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdh19Q80TF3 Gm44729-201ENSMUST00000206759 2052 ntBASIC15.18■□□□□ 0.02
Pcdh19Q80TF3 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdh19Q80TF3 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdh19Q80TF3 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC15.18■□□□□ 0.02
Pcdh19Q80TF3 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC15.18■□□□□ 0.02
Pcdh19Q80TF3 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdh19Q80TF3 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdh19Q80TF3 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
Pcdh19Q80TF3 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdh19Q80TF3 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdh19Q80TF3 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
Pcdh19Q80TF3 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdh19Q80TF3 Mymx-202ENSMUST00000169137 616 ntAPPRIS P4 TSL 2 BASIC15.18■□□□□ 0.02
Pcdh19Q80TF3 Gm4899-201ENSMUST00000178708 719 ntBASIC15.18■□□□□ 0.02
Pcdh19Q80TF3 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdh19Q80TF3 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdh19Q80TF3 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdh19Q80TF3 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC15.18■□□□□ 0.02
Pcdh19Q80TF3 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
Pcdh19Q80TF3 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
Pcdh19Q80TF3 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdh19Q80TF3 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdh19Q80TF3 Hivep3-201ENSMUST00000084306 2973 ntBASIC15.18■□□□□ 0.02
Pcdh19Q80TF3 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
Pcdh19Q80TF3 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdh19Q80TF3 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC15.18■□□□□ 0.02
Pcdh19Q80TF3 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC15.18■□□□□ 0.02
Pcdh19Q80TF3 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdh19Q80TF3 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdh19Q80TF3 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdh19Q80TF3 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdh19Q80TF3 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdh19Q80TF3 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
Pcdh19Q80TF3 Gm17018-201ENSMUST00000047057 1345 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdh19Q80TF3 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdh19Q80TF3 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdh19Q80TF3 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdh19Q80TF3 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdh19Q80TF3 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
Pcdh19Q80TF3 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdh19Q80TF3 Syk-203ENSMUST00000120135 5363 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdh19Q80TF3 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdh19Q80TF3 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdh19Q80TF3 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdh19Q80TF3 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC15.17■□□□□ 0.02
Pcdh19Q80TF3 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC15.17■□□□□ 0.02
Pcdh19Q80TF3 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC15.17■□□□□ 0.02
Pcdh19Q80TF3 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdh19Q80TF3 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdh19Q80TF3 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdh19Q80TF3 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdh19Q80TF3 Cadm3-202ENSMUST00000111220 5155 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdh19Q80TF3 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
Pcdh19Q80TF3 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdh19Q80TF3 Grk6-207ENSMUST00000225925 2769 ntBASIC15.17■□□□□ 0.02
Pcdh19Q80TF3 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdh19Q80TF3 Htatip2-201ENSMUST00000085272 1418 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdh19Q80TF3 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 33.6 ms