Protein–RNA interactions for Protein: Q6P9Z1

Smarcd3, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 3, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd3Q6P9Z1 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC14.25□□□□□ -0.13
Smarcd3Q6P9Z1 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Smarcd3Q6P9Z1 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Smarcd3Q6P9Z1 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Smarcd3Q6P9Z1 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Smarcd3Q6P9Z1 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Smarcd3Q6P9Z1 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC14.25□□□□□ -0.13
Smarcd3Q6P9Z1 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Smarcd3Q6P9Z1 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC14.25□□□□□ -0.13
Smarcd3Q6P9Z1 Myo9b-201ENSMUST00000071935 7082 ntAPPRIS P3 TSL 5 BASIC14.25□□□□□ -0.13
Smarcd3Q6P9Z1 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Smarcd3Q6P9Z1 Cand2-201ENSMUST00000075995 5474 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Smarcd3Q6P9Z1 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC14.25□□□□□ -0.13
Smarcd3Q6P9Z1 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Smarcd3Q6P9Z1 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC14.25□□□□□ -0.13
Smarcd3Q6P9Z1 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Smarcd3Q6P9Z1 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Smarcd3Q6P9Z1 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC14.24□□□□□ -0.13
Smarcd3Q6P9Z1 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Smarcd3Q6P9Z1 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Smarcd3Q6P9Z1 Adam10-201ENSMUST00000067880 4593 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Smarcd3Q6P9Z1 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Smarcd3Q6P9Z1 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Smarcd3Q6P9Z1 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Smarcd3Q6P9Z1 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Smarcd3Q6P9Z1 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Smarcd3Q6P9Z1 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Smarcd3Q6P9Z1 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC14.24□□□□□ -0.13
Smarcd3Q6P9Z1 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Smarcd3Q6P9Z1 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
Smarcd3Q6P9Z1 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Smarcd3Q6P9Z1 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Smarcd3Q6P9Z1 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Smarcd3Q6P9Z1 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
Smarcd3Q6P9Z1 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Smarcd3Q6P9Z1 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Smarcd3Q6P9Z1 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Smarcd3Q6P9Z1 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC14.24□□□□□ -0.13
Smarcd3Q6P9Z1 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Smarcd3Q6P9Z1 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Smarcd3Q6P9Z1 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Smarcd3Q6P9Z1 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Smarcd3Q6P9Z1 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Smarcd3Q6P9Z1 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Smarcd3Q6P9Z1 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Smarcd3Q6P9Z1 Morc4-201ENSMUST00000033811 4412 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Smarcd3Q6P9Z1 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Smarcd3Q6P9Z1 Mapk9-210ENSMUST00000178543 4677 ntAPPRIS ALT1 TSL 5 BASIC14.24□□□□□ -0.13
Smarcd3Q6P9Z1 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Smarcd3Q6P9Z1 Plxnb1-201ENSMUST00000072093 8649 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Smarcd3Q6P9Z1 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Smarcd3Q6P9Z1 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC14.24□□□□□ -0.13
Smarcd3Q6P9Z1 Gna15-201ENSMUST00000043709 1962 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Smarcd3Q6P9Z1 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Smarcd3Q6P9Z1 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
Smarcd3Q6P9Z1 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Smarcd3Q6P9Z1 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Smarcd3Q6P9Z1 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Smarcd3Q6P9Z1 Wwc2-201ENSMUST00000057561 8678 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Smarcd3Q6P9Z1 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Smarcd3Q6P9Z1 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Smarcd3Q6P9Z1 Galnt2-201ENSMUST00000034458 4113 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Smarcd3Q6P9Z1 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Smarcd3Q6P9Z1 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Smarcd3Q6P9Z1 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Smarcd3Q6P9Z1 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Smarcd3Q6P9Z1 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC14.23□□□□□ -0.13
Smarcd3Q6P9Z1 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Smarcd3Q6P9Z1 Nacc2-201ENSMUST00000028300 6378 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Smarcd3Q6P9Z1 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Smarcd3Q6P9Z1 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Smarcd3Q6P9Z1 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Smarcd3Q6P9Z1 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Smarcd3Q6P9Z1 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Smarcd3Q6P9Z1 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Smarcd3Q6P9Z1 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Smarcd3Q6P9Z1 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Smarcd3Q6P9Z1 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Smarcd3Q6P9Z1 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Smarcd3Q6P9Z1 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Smarcd3Q6P9Z1 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Smarcd3Q6P9Z1 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Smarcd3Q6P9Z1 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Smarcd3Q6P9Z1 Garem2-201ENSMUST00000058045 3865 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Smarcd3Q6P9Z1 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Smarcd3Q6P9Z1 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Smarcd3Q6P9Z1 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Smarcd3Q6P9Z1 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Smarcd3Q6P9Z1 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC14.22□□□□□ -0.13
Smarcd3Q6P9Z1 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC14.22□□□□□ -0.13
Smarcd3Q6P9Z1 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC14.22□□□□□ -0.13
Smarcd3Q6P9Z1 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Smarcd3Q6P9Z1 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Smarcd3Q6P9Z1 Max-202ENSMUST00000110395 1942 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Smarcd3Q6P9Z1 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Smarcd3Q6P9Z1 Gm5587-201ENSMUST00000206270 674 ntBASIC14.22□□□□□ -0.13
Smarcd3Q6P9Z1 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC14.22□□□□□ -0.13
Smarcd3Q6P9Z1 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Smarcd3Q6P9Z1 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Smarcd3Q6P9Z1 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 49.6 ms