Protein–RNA interactions for Protein: Q61216

Mre11, Double-strand break repair protein MRE11, mousemouse

Predictions only

Length 706 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mre11Q61216 Rbbp8nl-201ENSMUST00000038529 2319 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Mre11Q61216 Pcyt1a-202ENSMUST00000104893 4951 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
Mre11Q61216 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Mre11Q61216 Plcb1-205ENSMUST00000131552 7202 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Mre11Q61216 AC135637.1-201ENSMUST00000227750 365 ntBASIC18.6■□□□□ 0.57
Mre11Q61216 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Mre11Q61216 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Mre11Q61216 Ilf2-201ENSMUST00000001042 2027 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Mre11Q61216 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Mre11Q61216 Loxl2-202ENSMUST00000100420 3042 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Mre11Q61216 Gm7669-201ENSMUST00000210184 1603 ntBASIC18.6■□□□□ 0.57
Mre11Q61216 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Mre11Q61216 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Mre11Q61216 Rgs3-204ENSMUST00000107420 2752 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Mre11Q61216 Loxl1-201ENSMUST00000061799 3297 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Mre11Q61216 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Mre11Q61216 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
Mre11Q61216 B3gnt7-201ENSMUST00000113306 2582 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Mre11Q61216 Fam163b-201ENSMUST00000151224 2959 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Mre11Q61216 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Mre11Q61216 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Mre11Q61216 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
Mre11Q61216 Kif26a-201ENSMUST00000128402 6918 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Mre11Q61216 Trmt13-210ENSMUST00000198454 880 ntBASIC18.59■□□□□ 0.57
Mre11Q61216 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC18.59■□□□□ 0.57
Mre11Q61216 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Mre11Q61216 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC18.59■□□□□ 0.57
Mre11Q61216 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Mre11Q61216 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Mre11Q61216 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Mre11Q61216 Zmym3-201ENSMUST00000063577 6057 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Mre11Q61216 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Mre11Q61216 Tspan15-201ENSMUST00000047883 3638 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Mre11Q61216 Rnf103-203ENSMUST00000114179 2671 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.57
Mre11Q61216 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
Mre11Q61216 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Mre11Q61216 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Mre11Q61216 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC18.58■□□□□ 0.57
Mre11Q61216 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Mre11Q61216 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC18.58■□□□□ 0.56
Mre11Q61216 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC18.58■□□□□ 0.56
Mre11Q61216 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
Mre11Q61216 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC18.58■□□□□ 0.56
Mre11Q61216 Gm44878-201ENSMUST00000205812 1295 ntBASIC18.58■□□□□ 0.56
Mre11Q61216 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Mre11Q61216 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Mre11Q61216 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
Mre11Q61216 Bbs7-203ENSMUST00000108156 2687 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Mre11Q61216 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Mre11Q61216 Ralgapa1-201ENSMUST00000085385 7901 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Mre11Q61216 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Mre11Q61216 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
Mre11Q61216 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Mre11Q61216 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Mre11Q61216 Elovl6-205ENSMUST00000199910 2610 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Mre11Q61216 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Mre11Q61216 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Mre11Q61216 Xpo1-202ENSMUST00000102869 6004 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Mre11Q61216 Med15-201ENSMUST00000012259 3383 ntAPPRIS P4 TSL 1 (best) BASIC18.57■□□□□ 0.56
Mre11Q61216 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Mre11Q61216 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Mre11Q61216 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Mre11Q61216 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC18.57■□□□□ 0.56
Mre11Q61216 Gm11539-201ENSMUST00000119837 557 ntBASIC18.57■□□□□ 0.56
Mre11Q61216 C230004F18Rik-203ENSMUST00000137153 2138 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Mre11Q61216 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC18.57■□□□□ 0.56
Mre11Q61216 Gnpat-201ENSMUST00000034466 2984 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Mre11Q61216 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Mre11Q61216 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
Mre11Q61216 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Mre11Q61216 E330009J07Rik-202ENSMUST00000101492 6742 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Mre11Q61216 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
Mre11Q61216 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Mre11Q61216 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Mre11Q61216 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
Mre11Q61216 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Mre11Q61216 Grip2-205ENSMUST00000162300 5206 ntAPPRIS P2 TSL 5 BASIC18.56■□□□□ 0.56
Mre11Q61216 Otud4-202ENSMUST00000173078 7354 ntAPPRIS P4 TSL 1 (best) BASIC18.56■□□□□ 0.56
Mre11Q61216 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Mre11Q61216 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Mre11Q61216 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Mre11Q61216 Gm14780-201ENSMUST00000118387 2737 ntBASIC18.56■□□□□ 0.56
Mre11Q61216 Exoc3l-201ENSMUST00000057855 2497 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Mre11Q61216 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Mre11Q61216 Pgd-201ENSMUST00000084124 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Mre11Q61216 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC18.56■□□□□ 0.56
Mre11Q61216 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
Mre11Q61216 Gm20760-201ENSMUST00000179197 648 ntBASIC18.56■□□□□ 0.56
Mre11Q61216 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Mre11Q61216 Plscr3-201ENSMUST00000019605 1927 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Mre11Q61216 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
Mre11Q61216 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Mre11Q61216 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC18.55■□□□□ 0.56
Mre11Q61216 Drd5-201ENSMUST00000041646 3152 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
Mre11Q61216 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
Mre11Q61216 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Mre11Q61216 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Mre11Q61216 Brix1-201ENSMUST00000022855 2664 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Mre11Q61216 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Mre11Q61216 Usp31-201ENSMUST00000046929 10198 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 42.6 ms