Protein–RNA interactions for Protein: Q5R1I9

Trav2, T cell receptor alpha variable 2 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav2Q5R1I9 Dot1l-201ENSMUST00000105336 6808 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav2Q5R1I9 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav2Q5R1I9 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav2Q5R1I9 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Trav2Q5R1I9 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Trav2Q5R1I9 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav2Q5R1I9 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav2Q5R1I9 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav2Q5R1I9 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Trav2Q5R1I9 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Trav2Q5R1I9 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC12.37□□□□□ -0.43
Trav2Q5R1I9 Gm11185-201ENSMUST00000117732 1007 ntBASIC12.37□□□□□ -0.43
Trav2Q5R1I9 Gm15467-201ENSMUST00000120582 445 ntBASIC12.37□□□□□ -0.43
Trav2Q5R1I9 Gm12260-201ENSMUST00000122447 411 ntBASIC12.37□□□□□ -0.43
Trav2Q5R1I9 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav2Q5R1I9 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC12.37□□□□□ -0.43
Trav2Q5R1I9 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Trav2Q5R1I9 Gm38708-201ENSMUST00000203855 677 ntTSL 5 BASIC12.37□□□□□ -0.43
Trav2Q5R1I9 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC12.37□□□□□ -0.43
Trav2Q5R1I9 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav2Q5R1I9 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav2Q5R1I9 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav2Q5R1I9 Anp32e-201ENSMUST00000015893 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav2Q5R1I9 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav2Q5R1I9 Gm43072-201ENSMUST00000200283 1671 ntBASIC12.37□□□□□ -0.43
Trav2Q5R1I9 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav2Q5R1I9 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav2Q5R1I9 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav2Q5R1I9 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Trav2Q5R1I9 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC12.37□□□□□ -0.43
Trav2Q5R1I9 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav2Q5R1I9 Tmem201-201ENSMUST00000054459 4631 ntAPPRIS ALT2 TSL 2 BASIC12.37□□□□□ -0.43
Trav2Q5R1I9 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav2Q5R1I9 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav2Q5R1I9 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav2Q5R1I9 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav2Q5R1I9 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav2Q5R1I9 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
Trav2Q5R1I9 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav2Q5R1I9 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav2Q5R1I9 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav2Q5R1I9 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Trav2Q5R1I9 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav2Q5R1I9 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC12.36□□□□□ -0.43
Trav2Q5R1I9 Pcsk5-201ENSMUST00000025618 6675 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Trav2Q5R1I9 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Trav2Q5R1I9 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav2Q5R1I9 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav2Q5R1I9 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Trav2Q5R1I9 Skor1-202ENSMUST00000116613 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav2Q5R1I9 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav2Q5R1I9 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Trav2Q5R1I9 Gm5682-201ENSMUST00000173402 505 ntBASIC12.36□□□□□ -0.43
Trav2Q5R1I9 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Trav2Q5R1I9 Gm2213-201ENSMUST00000197485 688 ntBASIC12.36□□□□□ -0.43
Trav2Q5R1I9 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC12.36□□□□□ -0.43
Trav2Q5R1I9 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Trav2Q5R1I9 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC12.36□□□□□ -0.43
Trav2Q5R1I9 AC158538.2-201ENSMUST00000225455 906 ntBASIC12.36□□□□□ -0.43
Trav2Q5R1I9 AC151836.1-202ENSMUST00000226259 753 ntBASIC12.36□□□□□ -0.43
Trav2Q5R1I9 AC159093.1-201ENSMUST00000227779 380 ntBASIC12.36□□□□□ -0.43
Trav2Q5R1I9 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Trav2Q5R1I9 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC12.36□□□□□ -0.43
Trav2Q5R1I9 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav2Q5R1I9 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav2Q5R1I9 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav2Q5R1I9 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC12.36□□□□□ -0.43
Trav2Q5R1I9 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav2Q5R1I9 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav2Q5R1I9 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Trav2Q5R1I9 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav2Q5R1I9 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav2Q5R1I9 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav2Q5R1I9 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Trav2Q5R1I9 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav2Q5R1I9 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Trav2Q5R1I9 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav2Q5R1I9 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav2Q5R1I9 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav2Q5R1I9 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav2Q5R1I9 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Trav2Q5R1I9 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Trav2Q5R1I9 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav2Q5R1I9 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav2Q5R1I9 Alx4-201ENSMUST00000042078 5253 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav2Q5R1I9 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Trav2Q5R1I9 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Trav2Q5R1I9 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Trav2Q5R1I9 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav2Q5R1I9 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Trav2Q5R1I9 Gm18489-201ENSMUST00000172565 551 ntBASIC12.35□□□□□ -0.43
Trav2Q5R1I9 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC12.35□□□□□ -0.43
Trav2Q5R1I9 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav2Q5R1I9 Lrrc26-201ENSMUST00000028337 1190 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav2Q5R1I9 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC12.35□□□□□ -0.43
Trav2Q5R1I9 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav2Q5R1I9 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav2Q5R1I9 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
Trav2Q5R1I9 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav2Q5R1I9 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 42.9 ms