Protein–RNA interactions for Protein: Q5R1H9

Trav7d-4, T cell receptor alpha variable 7D-4 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7d-4Q5R1H9 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Trav7d-4Q5R1H9 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav7d-4Q5R1H9 Elac1-201ENSMUST00000041138 4971 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav7d-4Q5R1H9 Kctd14-205ENSMUST00000206279 2203 ntAPPRIS ALT2 TSL 2 BASIC11.85□□□□□ -0.51
Trav7d-4Q5R1H9 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Trav7d-4Q5R1H9 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC11.85□□□□□ -0.51
Trav7d-4Q5R1H9 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC11.85□□□□□ -0.51
Trav7d-4Q5R1H9 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Trav7d-4Q5R1H9 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav7d-4Q5R1H9 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC11.85□□□□□ -0.51
Trav7d-4Q5R1H9 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav7d-4Q5R1H9 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Trav7d-4Q5R1H9 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav7d-4Q5R1H9 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav7d-4Q5R1H9 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav7d-4Q5R1H9 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Trav7d-4Q5R1H9 Gm8784-201ENSMUST00000222096 1435 ntBASIC11.85□□□□□ -0.51
Trav7d-4Q5R1H9 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav7d-4Q5R1H9 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Trav7d-4Q5R1H9 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav7d-4Q5R1H9 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC11.84□□□□□ -0.51
Trav7d-4Q5R1H9 Gins2-201ENSMUST00000034278 3900 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav7d-4Q5R1H9 Acbd5-215ENSMUST00000228050 4804 ntAPPRIS ALT2 BASIC11.84□□□□□ -0.51
Trav7d-4Q5R1H9 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav7d-4Q5R1H9 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav7d-4Q5R1H9 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
Trav7d-4Q5R1H9 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC11.84□□□□□ -0.51
Trav7d-4Q5R1H9 Col3a1-201ENSMUST00000087883 5564 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav7d-4Q5R1H9 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav7d-4Q5R1H9 Sntb2-203ENSMUST00000212524 9945 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav7d-4Q5R1H9 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Trav7d-4Q5R1H9 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav7d-4Q5R1H9 Elmsan1-202ENSMUST00000110294 7156 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
Trav7d-4Q5R1H9 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC11.84□□□□□ -0.51
Trav7d-4Q5R1H9 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav7d-4Q5R1H9 Gm38027-201ENSMUST00000192315 235 ntBASIC11.84□□□□□ -0.51
Trav7d-4Q5R1H9 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav7d-4Q5R1H9 Gm7791-201ENSMUST00000219066 539 ntBASIC11.84□□□□□ -0.51
Trav7d-4Q5R1H9 Aqp11-205ENSMUST00000206389 3737 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav7d-4Q5R1H9 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav7d-4Q5R1H9 Arhgef5-201ENSMUST00000031750 5469 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
Trav7d-4Q5R1H9 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav7d-4Q5R1H9 Srsf10-202ENSMUST00000097844 3055 ntAPPRIS ALT1 TSL 2 BASIC11.84□□□□□ -0.51
Trav7d-4Q5R1H9 Gm43859-201ENSMUST00000200075 1412 ntBASIC11.84□□□□□ -0.51
Trav7d-4Q5R1H9 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav7d-4Q5R1H9 Gng2-204ENSMUST00000160013 3826 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav7d-4Q5R1H9 Entpd5-204ENSMUST00000117286 1691 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav7d-4Q5R1H9 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav7d-4Q5R1H9 Tdrd6-203ENSMUST00000168073 7062 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav7d-4Q5R1H9 Bcan-201ENSMUST00000090971 3141 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav7d-4Q5R1H9 Cadps2-213ENSMUST00000166458 4598 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
Trav7d-4Q5R1H9 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav7d-4Q5R1H9 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC11.83□□□□□ -0.51
Trav7d-4Q5R1H9 Tbx3-201ENSMUST00000018748 4856 ntTSL 1 (best) BASIC11.83□□□□□ -0.51
Trav7d-4Q5R1H9 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
Trav7d-4Q5R1H9 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav7d-4Q5R1H9 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav7d-4Q5R1H9 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav7d-4Q5R1H9 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav7d-4Q5R1H9 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav7d-4Q5R1H9 Gm10849-201ENSMUST00000100397 618 ntBASIC11.83□□□□□ -0.52
Trav7d-4Q5R1H9 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC11.83□□□□□ -0.52
Trav7d-4Q5R1H9 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
Trav7d-4Q5R1H9 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Trav7d-4Q5R1H9 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
Trav7d-4Q5R1H9 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC11.83□□□□□ -0.52
Trav7d-4Q5R1H9 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav7d-4Q5R1H9 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav7d-4Q5R1H9 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
Trav7d-4Q5R1H9 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav7d-4Q5R1H9 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Trav7d-4Q5R1H9 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav7d-4Q5R1H9 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav7d-4Q5R1H9 Lpcat2-201ENSMUST00000046290 2811 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav7d-4Q5R1H9 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav7d-4Q5R1H9 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC11.83□□□□□ -0.52
Trav7d-4Q5R1H9 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav7d-4Q5R1H9 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav7d-4Q5R1H9 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav7d-4Q5R1H9 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC11.83□□□□□ -0.52
Trav7d-4Q5R1H9 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Trav7d-4Q5R1H9 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
Trav7d-4Q5R1H9 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav7d-4Q5R1H9 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Trav7d-4Q5R1H9 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Trav7d-4Q5R1H9 Bet1l-201ENSMUST00000026557 2268 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav7d-4Q5R1H9 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav7d-4Q5R1H9 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav7d-4Q5R1H9 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav7d-4Q5R1H9 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav7d-4Q5R1H9 Foxj3-201ENSMUST00000044564 4789 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav7d-4Q5R1H9 Dym-201ENSMUST00000039608 2471 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav7d-4Q5R1H9 Map3k9-202ENSMUST00000222322 3303 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Trav7d-4Q5R1H9 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav7d-4Q5R1H9 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav7d-4Q5R1H9 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Trav7d-4Q5R1H9 Ss18-201ENSMUST00000040924 3090 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav7d-4Q5R1H9 Myh14-201ENSMUST00000048102 6457 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav7d-4Q5R1H9 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav7d-4Q5R1H9 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 28.3 ms