Protein–RNA interactions for Protein: Q5R1A3

Trdv4, T cell receptor delta variable 4 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trdv4Q5R1A3 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Trdv4Q5R1A3 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Trdv4Q5R1A3 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trdv4Q5R1A3 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Trdv4Q5R1A3 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trdv4Q5R1A3 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Trdv4Q5R1A3 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trdv4Q5R1A3 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC12.8□□□□□ -0.36
Trdv4Q5R1A3 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Trdv4Q5R1A3 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC12.8□□□□□ -0.36
Trdv4Q5R1A3 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC12.8□□□□□ -0.36
Trdv4Q5R1A3 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Trdv4Q5R1A3 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trdv4Q5R1A3 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trdv4Q5R1A3 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC12.8□□□□□ -0.36
Trdv4Q5R1A3 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Trdv4Q5R1A3 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trdv4Q5R1A3 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trdv4Q5R1A3 AC174678.1-201ENSMUST00000228007 2749 ntBASIC12.8□□□□□ -0.36
Trdv4Q5R1A3 Steap2-202ENSMUST00000115424 3285 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trdv4Q5R1A3 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trdv4Q5R1A3 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Trdv4Q5R1A3 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Trdv4Q5R1A3 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Trdv4Q5R1A3 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trdv4Q5R1A3 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trdv4Q5R1A3 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trdv4Q5R1A3 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC12.79□□□□□ -0.36
Trdv4Q5R1A3 Chst11-201ENSMUST00000040110 5527 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trdv4Q5R1A3 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trdv4Q5R1A3 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trdv4Q5R1A3 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trdv4Q5R1A3 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trdv4Q5R1A3 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trdv4Q5R1A3 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Trdv4Q5R1A3 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Trdv4Q5R1A3 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trdv4Q5R1A3 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trdv4Q5R1A3 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trdv4Q5R1A3 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trdv4Q5R1A3 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trdv4Q5R1A3 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trdv4Q5R1A3 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC12.79□□□□□ -0.36
Trdv4Q5R1A3 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC12.79□□□□□ -0.36
Trdv4Q5R1A3 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC12.79□□□□□ -0.36
Trdv4Q5R1A3 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trdv4Q5R1A3 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC12.79□□□□□ -0.36
Trdv4Q5R1A3 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Trdv4Q5R1A3 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trdv4Q5R1A3 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trdv4Q5R1A3 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trdv4Q5R1A3 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trdv4Q5R1A3 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trdv4Q5R1A3 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Trdv4Q5R1A3 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trdv4Q5R1A3 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Trdv4Q5R1A3 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Trdv4Q5R1A3 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Trdv4Q5R1A3 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Trdv4Q5R1A3 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trdv4Q5R1A3 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trdv4Q5R1A3 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trdv4Q5R1A3 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trdv4Q5R1A3 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trdv4Q5R1A3 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trdv4Q5R1A3 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trdv4Q5R1A3 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Trdv4Q5R1A3 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trdv4Q5R1A3 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC12.78□□□□□ -0.36
Trdv4Q5R1A3 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trdv4Q5R1A3 Psen2-201ENSMUST00000010753 2004 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trdv4Q5R1A3 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
Trdv4Q5R1A3 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trdv4Q5R1A3 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Trdv4Q5R1A3 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC12.78□□□□□ -0.36
Trdv4Q5R1A3 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC12.78□□□□□ -0.36
Trdv4Q5R1A3 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC12.78□□□□□ -0.36
Trdv4Q5R1A3 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC12.78□□□□□ -0.36
Trdv4Q5R1A3 Gm18622-201ENSMUST00000219361 595 ntBASIC12.78□□□□□ -0.36
Trdv4Q5R1A3 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trdv4Q5R1A3 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trdv4Q5R1A3 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC12.78□□□□□ -0.36
Trdv4Q5R1A3 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC12.78□□□□□ -0.36
Trdv4Q5R1A3 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trdv4Q5R1A3 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC12.78□□□□□ -0.36
Trdv4Q5R1A3 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trdv4Q5R1A3 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trdv4Q5R1A3 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trdv4Q5R1A3 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trdv4Q5R1A3 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Trdv4Q5R1A3 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trdv4Q5R1A3 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trdv4Q5R1A3 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trdv4Q5R1A3 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trdv4Q5R1A3 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trdv4Q5R1A3 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Trdv4Q5R1A3 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC12.77□□□□□ -0.36
Trdv4Q5R1A3 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Trdv4Q5R1A3 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.36
Trdv4Q5R1A3 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 31.7 ms