Protein–RNA interactions for Protein: Q4VGL6

Rc3h1, Roquin-1, mousemouse

Known RBP Predictions only

Length 1,130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rc3h1Q4VGL6 Cdkn1a-203ENSMUST00000122348 857 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Rc3h1Q4VGL6 Gm27244-201ENSMUST00000184260 380 ntTSL 5 BASIC17.87■□□□□ 0.45
Rc3h1Q4VGL6 Gm2756-201ENSMUST00000195851 400 ntBASIC17.87■□□□□ 0.45
Rc3h1Q4VGL6 Msantd1-204ENSMUST00000212362 798 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
Rc3h1Q4VGL6 Tspyl-ps-201ENSMUST00000220692 1117 ntBASIC17.87■□□□□ 0.45
Rc3h1Q4VGL6 Spr-201ENSMUST00000045986 1230 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Rc3h1Q4VGL6 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Rc3h1Q4VGL6 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Rc3h1Q4VGL6 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Rc3h1Q4VGL6 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
Rc3h1Q4VGL6 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Rc3h1Q4VGL6 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
Rc3h1Q4VGL6 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
Rc3h1Q4VGL6 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Rc3h1Q4VGL6 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
Rc3h1Q4VGL6 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Rc3h1Q4VGL6 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Rc3h1Q4VGL6 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Rc3h1Q4VGL6 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
Rc3h1Q4VGL6 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Rc3h1Q4VGL6 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Rc3h1Q4VGL6 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Rc3h1Q4VGL6 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Rc3h1Q4VGL6 Gm16151-201ENSMUST00000129696 639 ntTSL 3 BASIC17.86■□□□□ 0.45
Rc3h1Q4VGL6 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
Rc3h1Q4VGL6 Gm10499-201ENSMUST00000174094 934 ntBASIC17.86■□□□□ 0.45
Rc3h1Q4VGL6 Gm5177-201ENSMUST00000183092 997 ntBASIC17.86■□□□□ 0.45
Rc3h1Q4VGL6 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Rc3h1Q4VGL6 Gm45231-201ENSMUST00000208629 1064 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Rc3h1Q4VGL6 AC154572.2-201ENSMUST00000225105 997 ntBASIC17.86■□□□□ 0.45
Rc3h1Q4VGL6 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC17.86■□□□□ 0.45
Rc3h1Q4VGL6 Lypd1-201ENSMUST00000027582 1447 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Rc3h1Q4VGL6 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Rc3h1Q4VGL6 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Rc3h1Q4VGL6 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC17.85■□□□□ 0.45
Rc3h1Q4VGL6 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC17.85■□□□□ 0.45
Rc3h1Q4VGL6 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
Rc3h1Q4VGL6 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Rc3h1Q4VGL6 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Rc3h1Q4VGL6 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC17.85■□□□□ 0.45
Rc3h1Q4VGL6 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
Rc3h1Q4VGL6 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
Rc3h1Q4VGL6 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC17.85■□□□□ 0.45
Rc3h1Q4VGL6 Higd1a-206ENSMUST00000215300 605 ntAPPRIS P1 TSL 3 BASIC17.85■□□□□ 0.45
Rc3h1Q4VGL6 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
Rc3h1Q4VGL6 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Rc3h1Q4VGL6 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Rc3h1Q4VGL6 Fam126b-201ENSMUST00000038372 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Rc3h1Q4VGL6 Gm15500-202ENSMUST00000071641 1019 ntBASIC17.85■□□□□ 0.45
Rc3h1Q4VGL6 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Rc3h1Q4VGL6 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Rc3h1Q4VGL6 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Rc3h1Q4VGL6 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Rc3h1Q4VGL6 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Rc3h1Q4VGL6 Gm29361-201ENSMUST00000183323 2000 ntBASIC17.84■□□□□ 0.45
Rc3h1Q4VGL6 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Rc3h1Q4VGL6 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Rc3h1Q4VGL6 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC17.84■□□□□ 0.45
Rc3h1Q4VGL6 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Rc3h1Q4VGL6 AC157650.3-201ENSMUST00000225058 1476 ntBASIC17.84■□□□□ 0.45
Rc3h1Q4VGL6 Psmb10-201ENSMUST00000034369 1311 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Rc3h1Q4VGL6 Prmt7-203ENSMUST00000109297 1094 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Rc3h1Q4VGL6 Gm12892-201ENSMUST00000117367 1146 ntBASIC17.84■□□□□ 0.45
Rc3h1Q4VGL6 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC17.84■□□□□ 0.45
Rc3h1Q4VGL6 Ndufa1-201ENSMUST00000016571 419 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Rc3h1Q4VGL6 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Rc3h1Q4VGL6 Ndufaf2-202ENSMUST00000223734 556 ntBASIC17.84■□□□□ 0.45
Rc3h1Q4VGL6 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Rc3h1Q4VGL6 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Rc3h1Q4VGL6 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Rc3h1Q4VGL6 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Rc3h1Q4VGL6 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
Rc3h1Q4VGL6 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Rc3h1Q4VGL6 Max-202ENSMUST00000110395 1942 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
Rc3h1Q4VGL6 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Rc3h1Q4VGL6 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Rc3h1Q4VGL6 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Rc3h1Q4VGL6 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC17.84■□□□□ 0.45
Rc3h1Q4VGL6 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Rc3h1Q4VGL6 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Rc3h1Q4VGL6 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
Rc3h1Q4VGL6 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
Rc3h1Q4VGL6 Arl5c-201ENSMUST00000042971 1571 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Rc3h1Q4VGL6 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Rc3h1Q4VGL6 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Rc3h1Q4VGL6 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC17.83■□□□□ 0.45
Rc3h1Q4VGL6 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Rc3h1Q4VGL6 Gm12689-201ENSMUST00000094955 1359 ntAPPRIS P1 BASIC17.83■□□□□ 0.45
Rc3h1Q4VGL6 Gm44662-201ENSMUST00000206970 412 ntTSL 5 BASIC17.83■□□□□ 0.44
Rc3h1Q4VGL6 Tmem237-201ENSMUST00000087475 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Rc3h1Q4VGL6 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC17.83■□□□□ 0.44
Rc3h1Q4VGL6 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Rc3h1Q4VGL6 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Rc3h1Q4VGL6 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Rc3h1Q4VGL6 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Rc3h1Q4VGL6 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Rc3h1Q4VGL6 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
Rc3h1Q4VGL6 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Rc3h1Q4VGL6 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Rc3h1Q4VGL6 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC17.82■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 27.5 ms