Protein–RNA interactions for Protein: Q3U962

Col5a2, Collagen alpha-2(V) chain, mousemouse

Predictions only

Length 1,497 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col5a2Q3U962 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Col5a2Q3U962 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Col5a2Q3U962 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Col5a2Q3U962 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC18.22■□□□□ 0.51
Col5a2Q3U962 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Col5a2Q3U962 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Col5a2Q3U962 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Col5a2Q3U962 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Col5a2Q3U962 2310061I04Rik-204ENSMUST00000148721 1293 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
Col5a2Q3U962 Ffar3-202ENSMUST00000185748 1234 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
Col5a2Q3U962 Gm33337-201ENSMUST00000219594 228 ntTSL 3 BASIC18.21■□□□□ 0.51
Col5a2Q3U962 Pdlim7-203ENSMUST00000069968 1006 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Col5a2Q3U962 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Col5a2Q3U962 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Col5a2Q3U962 Rwdd2a-201ENSMUST00000034988 1355 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Col5a2Q3U962 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Col5a2Q3U962 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Col5a2Q3U962 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Col5a2Q3U962 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC18.21■□□□□ 0.51
Col5a2Q3U962 Gm6263-201ENSMUST00000120029 1342 ntBASIC18.21■□□□□ 0.51
Col5a2Q3U962 Gm10044-201ENSMUST00000081331 1312 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Col5a2Q3U962 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Col5a2Q3U962 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Col5a2Q3U962 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Col5a2Q3U962 Plekhb1-207ENSMUST00000116287 1911 ntAPPRIS ALT1 TSL 3 BASIC18.21■□□□□ 0.51
Col5a2Q3U962 Gm5357-201ENSMUST00000212720 1924 ntBASIC18.21■□□□□ 0.51
Col5a2Q3U962 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Col5a2Q3U962 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Col5a2Q3U962 Ggt6-203ENSMUST00000108499 874 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Col5a2Q3U962 Gm6539-201ENSMUST00000119157 1064 ntBASIC18.2■□□□□ 0.5
Col5a2Q3U962 Mtmr2-209ENSMUST00000156801 617 ntTSL 5 BASIC18.2■□□□□ 0.5
Col5a2Q3U962 Gm15494-202ENSMUST00000171665 451 ntTSL 2 BASIC18.2■□□□□ 0.5
Col5a2Q3U962 Mir7085-201ENSMUST00000184353 66 ntBASIC18.2■□□□□ 0.5
Col5a2Q3U962 Gm29667-201ENSMUST00000190817 490 ntBASIC18.2■□□□□ 0.5
Col5a2Q3U962 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
Col5a2Q3U962 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Col5a2Q3U962 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC18.2■□□□□ 0.5
Col5a2Q3U962 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Col5a2Q3U962 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Col5a2Q3U962 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Col5a2Q3U962 Nap1l1-208ENSMUST00000219961 1512 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Col5a2Q3U962 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
Col5a2Q3U962 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
Col5a2Q3U962 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Col5a2Q3U962 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Col5a2Q3U962 Tnfrsf12a-202ENSMUST00000167059 858 ntTSL 2 BASIC18.2■□□□□ 0.5
Col5a2Q3U962 Ube2f-210ENSMUST00000191368 1110 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Col5a2Q3U962 Gm44719-201ENSMUST00000206404 149 ntBASIC18.2■□□□□ 0.5
Col5a2Q3U962 Gm29682-201ENSMUST00000210896 1251 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Col5a2Q3U962 Tnfrsf12a-201ENSMUST00000024698 963 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Col5a2Q3U962 Gm6180-201ENSMUST00000065243 498 ntBASIC18.2■□□□□ 0.5
Col5a2Q3U962 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
Col5a2Q3U962 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Col5a2Q3U962 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Col5a2Q3U962 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Col5a2Q3U962 Gm44729-201ENSMUST00000206759 2052 ntBASIC18.19■□□□□ 0.5
Col5a2Q3U962 Gm13233-201ENSMUST00000118760 1443 ntBASIC18.19■□□□□ 0.5
Col5a2Q3U962 Gm13244-201ENSMUST00000118855 1446 ntBASIC18.19■□□□□ 0.5
Col5a2Q3U962 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Col5a2Q3U962 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Col5a2Q3U962 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Col5a2Q3U962 1700016P03Rik-201ENSMUST00000134252 863 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Col5a2Q3U962 Poc1a-205ENSMUST00000191434 1242 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Col5a2Q3U962 Mpc1-201ENSMUST00000046754 920 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
Col5a2Q3U962 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Col5a2Q3U962 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Col5a2Q3U962 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Col5a2Q3U962 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Col5a2Q3U962 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Col5a2Q3U962 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC18.18■□□□□ 0.5
Col5a2Q3U962 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Col5a2Q3U962 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Col5a2Q3U962 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Col5a2Q3U962 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Col5a2Q3U962 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Col5a2Q3U962 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Col5a2Q3U962 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC18.18■□□□□ 0.5
Col5a2Q3U962 Coprs-202ENSMUST00000209371 601 ntTSL 3 BASIC18.18■□□□□ 0.5
Col5a2Q3U962 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Col5a2Q3U962 Ramp3-201ENSMUST00000045374 1233 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Col5a2Q3U962 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Col5a2Q3U962 Max-202ENSMUST00000110395 1942 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
Col5a2Q3U962 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Col5a2Q3U962 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
Col5a2Q3U962 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Col5a2Q3U962 Gm42466-201ENSMUST00000202099 1301 ntBASIC18.17■□□□□ 0.5
Col5a2Q3U962 Taf6-201ENSMUST00000048698 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Col5a2Q3U962 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Col5a2Q3U962 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Col5a2Q3U962 Cyp2t4-201ENSMUST00000108385 1599 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
Col5a2Q3U962 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Col5a2Q3U962 Gm8515-201ENSMUST00000194852 576 ntBASIC18.17■□□□□ 0.5
Col5a2Q3U962 Calml4-201ENSMUST00000034777 864 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Col5a2Q3U962 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Col5a2Q3U962 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Col5a2Q3U962 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Col5a2Q3U962 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Col5a2Q3U962 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Col5a2Q3U962 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
Col5a2Q3U962 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 24.6 ms