Protein–RNA interactions for Protein: P63058

Thra, Thyroid hormone receptor alpha, mousemouse

Predictions only

Length 492 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ThraP63058 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC15.68■□□□□ 0.1
ThraP63058 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
ThraP63058 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC15.68■□□□□ 0.1
ThraP63058 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
ThraP63058 AC127349.1-201ENSMUST00000224590 266 ntBASIC15.68■□□□□ 0.1
ThraP63058 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
ThraP63058 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
ThraP63058 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
ThraP63058 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
ThraP63058 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
ThraP63058 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
ThraP63058 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
ThraP63058 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
ThraP63058 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
ThraP63058 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC15.68■□□□□ 0.1
ThraP63058 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
ThraP63058 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
ThraP63058 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
ThraP63058 Pitpnm2-209ENSMUST00000161938 5866 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
ThraP63058 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC15.68■□□□□ 0.1
ThraP63058 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
ThraP63058 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC15.67■□□□□ 0.1
ThraP63058 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
ThraP63058 Gm9889-202ENSMUST00000206983 1577 ntBASIC15.67■□□□□ 0.1
ThraP63058 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
ThraP63058 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC15.67■□□□□ 0.1
ThraP63058 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
ThraP63058 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
ThraP63058 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC15.67■□□□□ 0.1
ThraP63058 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
ThraP63058 Gm25745-201ENSMUST00000174945 133 ntBASIC15.67■□□□□ 0.1
ThraP63058 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC15.67■□□□□ 0.1
ThraP63058 Gm5712-201ENSMUST00000199748 1043 ntBASIC15.67■□□□□ 0.1
ThraP63058 Gm10060-201ENSMUST00000212002 111 ntBASIC15.67■□□□□ 0.1
ThraP63058 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
ThraP63058 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
ThraP63058 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
ThraP63058 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
ThraP63058 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
ThraP63058 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
ThraP63058 Gatad2a-203ENSMUST00000177851 5007 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
ThraP63058 Lamc1-201ENSMUST00000027752 7622 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
ThraP63058 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
ThraP63058 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
ThraP63058 Adgrd2-ps-201ENSMUST00000118797 2662 ntBASIC15.67■□□□□ 0.1
ThraP63058 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
ThraP63058 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC15.67■□□□□ 0.1
ThraP63058 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC15.67■□□□□ 0.1
ThraP63058 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
ThraP63058 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
ThraP63058 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
ThraP63058 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC15.67■□□□□ 0.1
ThraP63058 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
ThraP63058 Plcb1-205ENSMUST00000131552 7202 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
ThraP63058 Rbfox2-206ENSMUST00000227314 1810 ntBASIC15.66■□□□□ 0.1
ThraP63058 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
ThraP63058 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC15.66■□□□□ 0.1
ThraP63058 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
ThraP63058 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
ThraP63058 Grid2-201ENSMUST00000095852 5860 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
ThraP63058 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
ThraP63058 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
ThraP63058 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
ThraP63058 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
ThraP63058 Gm27525-201ENSMUST00000184465 107 ntBASIC15.66■□□□□ 0.1
ThraP63058 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC15.66■□□□□ 0.1
ThraP63058 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
ThraP63058 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
ThraP63058 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
ThraP63058 Gm5867-201ENSMUST00000063197 592 ntBASIC15.66■□□□□ 0.1
ThraP63058 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
ThraP63058 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC15.66■□□□□ 0.1
ThraP63058 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
ThraP63058 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
ThraP63058 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
ThraP63058 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
ThraP63058 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
ThraP63058 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
ThraP63058 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
ThraP63058 Gm42901-201ENSMUST00000197735 3171 ntBASIC15.66■□□□□ 0.1
ThraP63058 Sptlc2-201ENSMUST00000021424 6710 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
ThraP63058 9130024F11Rik-201ENSMUST00000135238 1300 ntTSL 2 BASIC15.66■□□□□ 0.1
ThraP63058 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
ThraP63058 Adamts14-201ENSMUST00000092486 5188 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
ThraP63058 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
ThraP63058 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC15.65■□□□□ 0.1
ThraP63058 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
ThraP63058 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
ThraP63058 Anp32e-201ENSMUST00000015893 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
ThraP63058 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
ThraP63058 Cpeb3-201ENSMUST00000079754 5899 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
ThraP63058 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
ThraP63058 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC15.65■□□□□ 0.1
ThraP63058 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC15.65■□□□□ 0.1
ThraP63058 Rbfox2-207ENSMUST00000227533 1041 ntBASIC15.65■□□□□ 0.1
ThraP63058 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
ThraP63058 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
ThraP63058 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
ThraP63058 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
ThraP63058 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 34.7 ms