Protein–RNA interactions for Protein: P50220

Nkx2-1, Homeobox protein Nkx-2.1, mousemouse

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-1P50220 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC12.88□□□□□ -0.35
Nkx2-1P50220 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Nkx2-1P50220 Gm6858-201ENSMUST00000208582 1468 ntBASIC12.88□□□□□ -0.35
Nkx2-1P50220 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Nkx2-1P50220 Kif11-201ENSMUST00000012587 4819 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Nkx2-1P50220 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Nkx2-1P50220 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
Nkx2-1P50220 Mcidas-201ENSMUST00000092089 2377 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Nkx2-1P50220 Gm5934-201ENSMUST00000120734 2588 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Nkx2-1P50220 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC12.88□□□□□ -0.35
Nkx2-1P50220 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Nkx2-1P50220 Gm13034-201ENSMUST00000121342 3177 ntBASIC12.88□□□□□ -0.35
Nkx2-1P50220 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Nkx2-1P50220 Gopc-201ENSMUST00000020008 4216 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Nkx2-1P50220 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC12.88□□□□□ -0.35
Nkx2-1P50220 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Nkx2-1P50220 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Nkx2-1P50220 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Nkx2-1P50220 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Nkx2-1P50220 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Nkx2-1P50220 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Nkx2-1P50220 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Nkx2-1P50220 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Nkx2-1P50220 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Nkx2-1P50220 AC132265.1-201ENSMUST00000219233 1665 ntBASIC12.87□□□□□ -0.35
Nkx2-1P50220 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC12.87□□□□□ -0.35
Nkx2-1P50220 Rest-202ENSMUST00000113449 6924 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Nkx2-1P50220 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Nkx2-1P50220 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Nkx2-1P50220 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Nkx2-1P50220 Gpr155-202ENSMUST00000076463 5061 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
Nkx2-1P50220 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Nkx2-1P50220 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Nkx2-1P50220 Gm13474-201ENSMUST00000122466 815 ntBASIC12.87□□□□□ -0.35
Nkx2-1P50220 AL672049.1-201ENSMUST00000197943 91 ntBASIC12.87□□□□□ -0.35
Nkx2-1P50220 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Nkx2-1P50220 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Nkx2-1P50220 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Nkx2-1P50220 Kpnb1-201ENSMUST00000001479 5894 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Nkx2-1P50220 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Nkx2-1P50220 Atp2c2-201ENSMUST00000095171 3222 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Nkx2-1P50220 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC12.87□□□□□ -0.35
Nkx2-1P50220 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Nkx2-1P50220 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
Nkx2-1P50220 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Nkx2-1P50220 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Nkx2-1P50220 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Nkx2-1P50220 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Nkx2-1P50220 Tpr-203ENSMUST00000124973 7430 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Nkx2-1P50220 Atp2a3-207ENSMUST00000163326 4606 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
Nkx2-1P50220 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
Nkx2-1P50220 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Nkx2-1P50220 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Nkx2-1P50220 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Nkx2-1P50220 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Nkx2-1P50220 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Nkx2-1P50220 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Nkx2-1P50220 Grik4-202ENSMUST00000114865 5887 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Nkx2-1P50220 Tbc1d22b-201ENSMUST00000048677 3592 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Nkx2-1P50220 Epha2-201ENSMUST00000006614 3913 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Nkx2-1P50220 Gm16061-201ENSMUST00000122167 857 ntBASIC12.86□□□□□ -0.35
Nkx2-1P50220 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC12.86□□□□□ -0.35
Nkx2-1P50220 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC12.86□□□□□ -0.35
Nkx2-1P50220 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Nkx2-1P50220 Gm9484-201ENSMUST00000195892 1159 ntBASIC12.86□□□□□ -0.35
Nkx2-1P50220 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Nkx2-1P50220 Gm11839-201ENSMUST00000120647 1953 ntBASIC12.86□□□□□ -0.35
Nkx2-1P50220 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Nkx2-1P50220 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Nkx2-1P50220 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Nkx2-1P50220 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Nkx2-1P50220 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Nkx2-1P50220 Zfp36-202ENSMUST00000209061 2465 ntAPPRIS ALT2 BASIC12.86□□□□□ -0.35
Nkx2-1P50220 Elac1-201ENSMUST00000041138 4971 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Nkx2-1P50220 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Nkx2-1P50220 Mospd2-201ENSMUST00000004715 2015 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Nkx2-1P50220 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Nkx2-1P50220 Gm37728-201ENSMUST00000195025 2292 ntBASIC12.86□□□□□ -0.35
Nkx2-1P50220 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Nkx2-1P50220 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Nkx2-1P50220 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Nkx2-1P50220 Tsc2-221ENSMUST00000228412 5432 ntAPPRIS ALT2 BASIC12.86□□□□□ -0.35
Nkx2-1P50220 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Nkx2-1P50220 Hps5-201ENSMUST00000014562 4953 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Nkx2-1P50220 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Nkx2-1P50220 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Nkx2-1P50220 Hectd1-202ENSMUST00000179265 9012 ntTSL 5 BASIC12.85□□□□□ -0.35
Nkx2-1P50220 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC12.85□□□□□ -0.35
Nkx2-1P50220 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Nkx2-1P50220 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC12.85□□□□□ -0.35
Nkx2-1P50220 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Nkx2-1P50220 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Nkx2-1P50220 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Nkx2-1P50220 Wdfy3-206ENSMUST00000174698 3858 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Nkx2-1P50220 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Nkx2-1P50220 Gapvd1-202ENSMUST00000102800 8339 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Nkx2-1P50220 Zbtb20-202ENSMUST00000114690 2759 ntAPPRIS ALT1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Nkx2-1P50220 Gm45760-201ENSMUST00000212190 1782 ntBASIC12.85□□□□□ -0.35
Nkx2-1P50220 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Nkx2-1P50220 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 41.2 ms