Protein–RNA interactions for Protein: P35582

Foxa1, Hepatocyte nuclear factor 3-alpha, mousemouse

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxa1P35582 Gm7286-201ENSMUST00000182691 1007 ntBASIC14.32□□□□□ -0.12
Foxa1P35582 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Foxa1P35582 AC159093.1-201ENSMUST00000227779 380 ntBASIC14.32□□□□□ -0.12
Foxa1P35582 Gm7461-201ENSMUST00000058918 827 ntBASIC14.32□□□□□ -0.12
Foxa1P35582 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Foxa1P35582 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Foxa1P35582 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Foxa1P35582 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Foxa1P35582 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Foxa1P35582 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Foxa1P35582 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Foxa1P35582 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Foxa1P35582 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Foxa1P35582 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Foxa1P35582 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Foxa1P35582 Cdc42se2-201ENSMUST00000064104 3069 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Foxa1P35582 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Foxa1P35582 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Foxa1P35582 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Foxa1P35582 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
Foxa1P35582 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Foxa1P35582 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Foxa1P35582 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Foxa1P35582 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC14.31□□□□□ -0.12
Foxa1P35582 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Foxa1P35582 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Foxa1P35582 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC14.31□□□□□ -0.12
Foxa1P35582 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Foxa1P35582 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Foxa1P35582 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Foxa1P35582 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Foxa1P35582 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Foxa1P35582 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Foxa1P35582 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Foxa1P35582 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Foxa1P35582 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Foxa1P35582 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Foxa1P35582 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Foxa1P35582 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Foxa1P35582 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Foxa1P35582 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC14.31□□□□□ -0.12
Foxa1P35582 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Foxa1P35582 Dlgap1-207ENSMUST00000133983 7173 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Foxa1P35582 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Foxa1P35582 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Foxa1P35582 Ptprs-211ENSMUST00000223859 5588 ntBASIC14.31□□□□□ -0.12
Foxa1P35582 Adamts14-201ENSMUST00000092486 5188 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Foxa1P35582 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Foxa1P35582 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Foxa1P35582 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC14.31□□□□□ -0.12
Foxa1P35582 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Foxa1P35582 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Foxa1P35582 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Foxa1P35582 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Foxa1P35582 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Foxa1P35582 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Foxa1P35582 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Foxa1P35582 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Foxa1P35582 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Foxa1P35582 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Foxa1P35582 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC14.3□□□□□ -0.12
Foxa1P35582 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Foxa1P35582 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Foxa1P35582 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC14.3□□□□□ -0.12
Foxa1P35582 Gm7230-201ENSMUST00000173026 815 ntBASIC14.3□□□□□ -0.12
Foxa1P35582 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Foxa1P35582 AC160980.1-201ENSMUST00000224136 970 ntBASIC14.3□□□□□ -0.12
Foxa1P35582 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC14.3□□□□□ -0.12
Foxa1P35582 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Foxa1P35582 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Foxa1P35582 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Foxa1P35582 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Foxa1P35582 Gna15-201ENSMUST00000043709 1962 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Foxa1P35582 Gm27528-202ENSMUST00000222916 2012 ntBASIC14.3□□□□□ -0.12
Foxa1P35582 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Foxa1P35582 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Foxa1P35582 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Foxa1P35582 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC14.3□□□□□ -0.12
Foxa1P35582 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Foxa1P35582 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Foxa1P35582 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Foxa1P35582 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Foxa1P35582 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Foxa1P35582 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Foxa1P35582 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Foxa1P35582 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Foxa1P35582 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Foxa1P35582 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Foxa1P35582 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Foxa1P35582 Gm14722-201ENSMUST00000118943 689 ntBASIC14.29□□□□□ -0.12
Foxa1P35582 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Foxa1P35582 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC14.29□□□□□ -0.12
Foxa1P35582 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC14.29□□□□□ -0.12
Foxa1P35582 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
Foxa1P35582 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Foxa1P35582 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Foxa1P35582 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC14.29□□□□□ -0.12
Foxa1P35582 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC14.29□□□□□ -0.12
Foxa1P35582 Gm10060-201ENSMUST00000212002 111 ntBASIC14.29□□□□□ -0.12
Foxa1P35582 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC14.29□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 70.9 ms